RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 MRPL1Q9BYD6 325 aaKnown RBP17.97■□□□□ 0.47
SYNE4-202ENST00000340477 STMN4Q9H169 189 aaPredicted RBP17.97■□□□□ 0.47
SYNE4-202ENST00000340477 C12orf65Q9H3J6 166 aaKnown RBP17.97■□□□□ 0.47
SYNE4-202ENST00000340477 FARSBQ9NSD9 589 aaKnown RBP17.97■□□□□ 0.47
SYNE4-202ENST00000340477 ZNF225Q9UK10 706 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 CLCA3PQ9Y6N3 262 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 TRIM13O60858 407 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 TNNI3P19429 210 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 PCLAFQ15004 111 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 TLR1Q15399 786 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 MEP1AQ16819 746 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 LRIG3Q6UXM1 1119 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 METTL4Q8N3J2 472 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 B3GNT7Q8NFL0 401 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 OR14A16Q8NHC5 309 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 SUN3Q8TAQ9 357 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 TCP10LQ8TDR4 215 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 PSMF1Q92530 271 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 TRMOQ9BU70 441 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 ZNF717Q9BY31 904 aaPredicted RBP17.96■□□□□ 0.47
SYNE4-202ENST00000340477 ALOXE3Q9BYJ1 711 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 ZBTB20Q9HC78 741 aaPredicted RBP17.96■□□□□ 0.47
SYNE4-202ENST00000340477 MAP10Q9P2G4 905 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 VPS29Q9UBQ0 182 aa17.96■□□□□ 0.47
SYNE4-202ENST00000340477 GOLGA6L10A6NI86 522 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 LDB3O75112 727 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 KLK1P06870 262 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 CLCN2P51788 898 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 MAPK12P53778 367 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 HNRNPH2P55795 449 aaKnown RBP17.95■□□□□ 0.46
SYNE4-202ENST00000340477 PLIN5Q00G26 463 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 IMPG1Q17R60 797 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 TCHHL1Q5QJ38 904 aaPredicted RBP17.95■□□□□ 0.46
SYNE4-202ENST00000340477 OR52E8Q6IFG1 317 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 Q6ZS92 163 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 COMMD6Q7Z4G1 85 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 VMP1Q96GC9 406 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 DGAT2Q96PD7 388 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 ZIM3Q96PE6 472 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 HBEGFQ99075 208 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 PELOQ9BRX2 385 aaKnown RBP17.95■□□□□ 0.46
SYNE4-202ENST00000340477 DEFB126Q9BYW3 111 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 TRIM4Q9C037 500 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 RNF32Q9H0A6 362 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.95■□□□□ 0.46
SYNE4-202ENST00000340477 STMN3Q9NZ72 180 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 LUZP4Q9P127 313 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 ATG4BQ9Y4P1 393 aa17.95■□□□□ 0.46
SYNE4-202ENST00000340477 CTIFO43310 598 aaKnown RBP17.94■□□□□ 0.46
SYNE4-202ENST00000340477 PROM1O43490 865 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 TMPRSS11DO60235 418 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 SORBS2O94875 1100 aaKnown RBP17.94■□□□□ 0.46
SYNE4-202ENST00000340477 CHEK2O96017 543 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 GBAP04062 536 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 CD97P48960 835 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 ZNF169Q14929 603 aaPredicted RBP17.94■□□□□ 0.46
SYNE4-202ENST00000340477 SPIN4Q56A73 249 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 ACER2Q5QJU3 275 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 B3GNTL1Q67FW5 361 aaPredicted RBP17.94■□□□□ 0.46
SYNE4-202ENST00000340477 MRM1Q6IN84 353 aaKnown RBP17.94■□□□□ 0.46
SYNE4-202ENST00000340477 LGI4Q8N135 537 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 ELP5Q8TE02 316 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 EML4Q9HC35 981 aaKnown RBP17.94■□□□□ 0.46
SYNE4-202ENST00000340477 SLC17A7Q9P2U7 560 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 COPS7AQ9UBW8 275 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 VTI1BQ9UEU0 232 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 ASB4Q9Y574 426 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 TIMM22Q9Y584 194 aa17.94■□□□□ 0.46
SYNE4-202ENST00000340477 TRAV17A0A0B4J275 112 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 TRBV11-1A0A0K0K1C0 115 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 C17orf105B2RV13 164 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 TGFBR3LH3BV60 316 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 FGF17O60258 216 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 OR10H2O60403 315 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 AIFM1O95831 613 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 UROSP10746 265 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 ALDH3A1P30838 453 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 ID2Q02363 134 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 ACSM2AQ08AH3 577 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 ACSM2BQ68CK6 577 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 C18orf63Q68DL7 685 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 H3F3CQ6NXT2 135 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 ATCAYQ86WG3 371 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 CRLF3Q8IUI8 442 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 C1orf52Q8N6N3 182 aaKnown RBP17.93■□□□□ 0.46
SYNE4-202ENST00000340477 MORN4Q8NDC4 146 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 PPP1R14CQ8TAE6 165 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 CPT1CQ8TCG5 803 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 NCLNQ969V3 563 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 RBM18Q96H35 190 aaKnown RBP17.93■□□□□ 0.46
SYNE4-202ENST00000340477 ART5Q96L15 291 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 KCNA7Q96RP8 456 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 FAIM2Q9BWQ8 316 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 GATA5Q9BWX5 397 aaPredicted RBP17.93■□□□□ 0.46
SYNE4-202ENST00000340477 SSU72Q9NP77 194 aaKnown RBP17.93■□□□□ 0.46
SYNE4-202ENST00000340477 CNTRLQ7Z7A1 2325 aa17.93■□□□□ 0.46
SYNE4-202ENST00000340477 OR5H15A6NDH6 313 aa17.92■□□□□ 0.46
SYNE4-202ENST00000340477 FCHO1O14526 889 aa17.92■□□□□ 0.46
SYNE4-202ENST00000340477 UBFD1O14562 309 aaKnown RBP17.92■□□□□ 0.46
SYNE4-202ENST00000340477 NPHS1O60500 1241 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms