RNA–Protein interactions for RNA: ENST00000340369.3

XIRP1-201, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XIRP1, Length 6,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-201ENST00000340369 FETUBQ9UGM5 382 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 CCRL2O00421 344 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 ARL6IP5O75915 188 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 APOL3O95236 402 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 YES1P07947 543 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 SEMA3AQ14563 771 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 ARSKQ6UWY0 536 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 CLDN19Q8N6F1 224 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 CD300LFQ8TDQ1 290 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 CASTOR1Q8WTX7 329 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 C12orf43Q96C57 262 aaKnown RBP12.13□□□□□ -0.47
XIRP1-201ENST00000340369 TMEM80Q96HE8 168 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 SH3YL1Q96HL8 342 aaPredicted RBP12.13□□□□□ -0.47
XIRP1-201ENST00000340369 TMEM41AQ96HV5 264 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 LRIG1Q96JA1 1093 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 SLC7A8Q9UHI5 535 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 ADAMTS3O15072 1205 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 XPNPEP2O43895 674 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 C6orf47O95873 294 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 CHRM1P11229 460 aaPredicted RBP12.13□□□□□ -0.47
XIRP1-201ENST00000340369 ADRB3P13945 408 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 IL1R2P27930 398 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 SLC6A11P48066 632 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 CLRN1P58418 232 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 PSMA6P60900 246 aaKnown RBP12.13□□□□□ -0.47
XIRP1-201ENST00000340369 SEC23BQ15437 767 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 TSSK6Q9BXA6 273 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 BEX2Q9BXY8 128 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 GPN2Q9H9Y4 310 aaPredicted RBP12.13□□□□□ -0.47
XIRP1-201ENST00000340369 BEX1Q9HBH7 125 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 SH2B3Q9UQQ2 575 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 PTRH2Q9Y3E5 179 aaKnown RBP12.13□□□□□ -0.47
XIRP1-201ENST00000340369 PCDHB14Q9Y5E9 798 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 M0QX08 132 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 AGPSO00116 658 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 RNF13O43567 381 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 CBSLP0DN79 551 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 CBSP35520 551 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 AFF1P51825 1210 aaKnown RBP12.13□□□□□ -0.47
XIRP1-201ENST00000340369 RPS3AP61247 264 aaKnown RBP12.13□□□□□ -0.47
XIRP1-201ENST00000340369 SLC18A2Q05940 514 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 RAET1LQ5VY80 246 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 EIF5AL1Q6IS14 154 aaKnown RBP12.13□□□□□ -0.47
XIRP1-201ENST00000340369 ZNF100Q8IYN0 542 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 NIPA2Q8N8Q9 360 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 ZBTB8BQ8NAP8 495 aaPredicted RBP12.13□□□□□ -0.47
XIRP1-201ENST00000340369 SHKBP1Q8TBC3 707 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 TCEAL3Q969E4 200 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 MAPKAP1Q9BPZ7 522 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 PROS1P07225 676 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 TUBG1P23258 451 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 ZBED5Q49AG3 693 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 C9orf50Q5SZB4 431 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 SLC15A3Q8IY34 581 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 HSPBAP1Q96EW2 488 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 CPNE2Q96FN4 548 aaPredicted RBP12.13□□□□□ -0.47
XIRP1-201ENST00000340369 DNAJC27Q9NZQ0 273 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 MKLN1Q9UL63 735 aa12.13□□□□□ -0.47
XIRP1-201ENST00000340369 SEC14L5O43304 696 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 BCKDHAP12694 445 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 SMAD4Q13485 552 aaKnown RBP12.12□□□□□ -0.47
XIRP1-201ENST00000340369 UGT8Q16880 541 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 VN1R2Q8NFZ6 395 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 NINJ1Q92982 152 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 S100A16Q96FQ6 103 aaKnown RBP12.12□□□□□ -0.47
XIRP1-201ENST00000340369 TMEM74Q96NL1 305 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 PKP2Q99959 881 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 OR51B5Q9H339 312 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 GLS2Q9UI32 602 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 RNF11Q9Y3C5 154 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 PCDHGA6Q9Y5G7 932 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 PRAMEF11O60813 436 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 CD40LGP29965 261 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 SLC15A1P46059 708 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 NR0B1P51843 470 aaKnown RBP12.12□□□□□ -0.47
XIRP1-201ENST00000340369 ACY1Q03154 408 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 SLC35F1Q5T1Q4 408 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 OR8K3Q8NH51 312 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 SLC35F5Q8WV83 523 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 DNAJC25-GNG10A0A024R161 153 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 SIM1P81133 766 aaPredicted RBP12.12□□□□□ -0.47
XIRP1-201ENST00000340369 E2F1Q01094 437 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 RHDQ02161 417 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 RHEBQ15382 184 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 CYP1B1Q16678 543 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 OR56A1Q8NGH5 318 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 RDH8Q9NYR8 311 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 DNMT3BQ9UBC3 853 aaKnown RBP12.12□□□□□ -0.47
XIRP1-201ENST00000340369 DNMT3AQ9Y6K1 912 aaPredicted RBP12.12□□□□□ -0.47
XIRP1-201ENST00000340369 PHRF1Q9P1Y6 1649 aaKnown RBP12.12□□□□□ -0.47
XIRP1-201ENST00000340369 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.12□□□□□ -0.47
XIRP1-201ENST00000340369 CDC14CA4D256 554 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 EFCAB7A8K855 629 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 K7ERQ8 282 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 HLA-DPB1P04440 258 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 G6PDP11413 515 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 PRKACGP22612 351 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 HADHBP55084 474 aaKnown RBP12.12□□□□□ -0.47
XIRP1-201ENST00000340369 FXYD6P3P58550 94 aa12.12□□□□□ -0.47
XIRP1-201ENST00000340369 LAPTM4AQ15012 233 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms