RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 BOKQ9UMX3 212 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-202ENST00000338995 CLDN16Q9Y5I7 305 aa13.16□□□□□ -0.3
COMMD4-202ENST00000338995 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.16□□□□□ -0.3
COMMD4-202ENST00000338995 HCFC1P51610 2035 aa13.16□□□□□ -0.3
COMMD4-202ENST00000338995 SETD2Q9BYW2 2564 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-202ENST00000338995 CELSR1Q9NYQ6 3014 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 HSPB2A8KAH6 182 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 TGFBR3LH3BV60 316 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 ZSCAN12O43309 604 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 CERS1P27544 350 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 TLX1P31314 330 aaPredicted RBP13.15□□□□□ -0.3
COMMD4-202ENST00000338995 GGT5P36269 586 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 MAGEA5P43359 124 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 KIR2DL3P43628 341 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 IST1P53990 364 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 POU4F1Q01851 419 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 IRF8Q02556 426 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 SF3B4Q15427 424 aaKnown RBP eCLIP13.15□□□□□ -0.33e-6■■■■■ 28.5
COMMD4-202ENST00000338995 HSPB2Q16082 182 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 PDK4Q16654 411 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 TMEM35AQ53FP2 167 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 PIGGQ5H8A4 983 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 C1orf185Q5T7R7 199 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 GOT1L1Q8NHS2 421 aaPredicted RBP13.15□□□□□ -0.3
COMMD4-202ENST00000338995 SLC2A12Q8TD20 617 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 ART5Q96L15 291 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 DGAT2Q96PD7 388 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 F2RL3Q96RI0 385 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 CENPKQ9BS16 269 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 POLDIP3Q9BY77 421 aaKnown RBP13.15□□□□□ -0.3
COMMD4-202ENST00000338995 PHACTR1Q9C0D0 580 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 RHOJQ9H4E5 214 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 PRDM7Q9NQW5 492 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 MS4A12Q9NXJ0 267 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 CNIH4Q9P003 139 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 SNX12Q9UMY4 172 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 PCDHGB3Q9Y5G1 929 aa13.15□□□□□ -0.3
COMMD4-202ENST00000338995 A0A0G2JNJ9 132 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 MYOCOSA0A1B0GUC4 107 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 TCP1P17987 556 aaKnown RBP13.14□□□□□ -0.31
COMMD4-202ENST00000338995 CPN2P22792 545 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 DNASE1P24855 282 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 IVDP26440 423 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 SERPINB3P29508 390 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 SERPINB1P30740 379 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 ATP6V0D1P61421 351 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 ASPHQ12797 758 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 PDIA2Q13087 525 aaKnown RBP13.14□□□□□ -0.31
COMMD4-202ENST00000338995 DOC2AQ14183 400 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 ZNF460Q14592 562 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 TBCCQ15814 346 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 C18orf21Q32NC0 220 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-202ENST00000338995 RIPPLY2Q5TAB7 128 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 WDR53Q7Z5U6 358 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-202ENST00000338995 ANKMY2Q8IV38 441 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 SLC35F6Q8N357 371 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 LIX1Q8N485 282 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 ACOT4Q8N9L9 421 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 NUBPLQ8TB37 319 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 ANKRD49Q8WVL7 239 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 SREK1Q8WXA9 508 aaKnown RBP13.14□□□□□ -0.31
COMMD4-202ENST00000338995 CDKL2Q92772 493 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 WDR34Q96EX3 536 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 SENP5Q96HI0 755 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-202ENST00000338995 CSF3RQ99062 836 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 TUBA8Q9NY65 449 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-202ENST00000338995 MOCS1Q9NZB8 636 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 CD274Q9NZQ7 290 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 Q9UFV3 132 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 ADGRE2Q9UHX3 823 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 ZNF490Q9ULM2 529 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-202ENST00000338995 PSAT1Q9Y617 370 aa13.14□□□□□ -0.31
COMMD4-202ENST00000338995 IQANK1A0A1B0GTG1 560 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 CCNT2O60583 730 aaKnown RBP13.13□□□□□ -0.31
COMMD4-202ENST00000338995 DIAPH2O60879 1101 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 LDB3O75112 727 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 CTAG2O75638 210 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 CCDC166P0CW27 439 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 ATP5A1P25705 553 aaKnown RBP13.13□□□□□ -0.31
COMMD4-202ENST00000338995 MSH2P43246 934 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 HSPA7P48741 367 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 DNASE1L1P49184 302 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 KCNJ2P63252 427 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 DR1Q01658 176 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 FOXO1Q12778 655 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 CHIT1Q13231 466 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 FBXW8Q8N3Y1 598 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 FBXO36Q8NEA4 188 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 TANKQ92844 425 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 CAPZA3Q96KX2 299 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 MAPKAP1Q9BPZ7 522 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 TMUB1Q9BVT8 246 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 PLAC1Q9HBJ0 212 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 ZFP64Q9NPA5 681 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 QPCTLQ9NXS2 382 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 L3MBTL1Q9Y468 752 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 ATG4BQ9Y4P1 393 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 FAM215AQ9Y5M1 114 aa13.13□□□□□ -0.31
COMMD4-202ENST00000338995 A0A0G2JMM0 328 aa13.12□□□□□ -0.31
COMMD4-202ENST00000338995 A0A1W2PPB8 328 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms