RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 GPR179Q6PRD1 2367 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 A0A0A6YYC8 382 aaPredicted RBP13.88□□□□□ -0.19
CBX3-201ENST00000337620 HYKKA2RU49 373 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 TMEM150CB9EJG8 249 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 I3L1I5 382 aaPredicted RBP13.88□□□□□ -0.19
CBX3-201ENST00000337620 LMNAP02545 664 aaKnown RBP13.88□□□□□ -0.19
CBX3-201ENST00000337620 C8orf89P0DMQ9 161 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 NCK1P16333 377 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 NUBP1P53384 320 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 PCBP4P57723 403 aaKnown RBP13.88□□□□□ -0.19
CBX3-201ENST00000337620 TNFRSF17Q02223 184 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 HSPB3Q12988 150 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 SNCBQ16143 134 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 TMTC4Q5T4D3 741 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 ANGPTL8Q6UXH0 198 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 ZNF574Q6ZN55 896 aaPredicted RBP13.88□□□□□ -0.19
CBX3-201ENST00000337620 C10orf111Q8N326 155 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 D2HGDHQ8N465 521 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 ARHGEF39Q8N4T4 335 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 OR2T12Q8NG77 320 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 OR5AK3PQ8NH89 298 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 OR5P2Q8WZ92 322 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 ZBED6CLQ96FA7 236 aaPredicted RBP13.88□□□□□ -0.19
CBX3-201ENST00000337620 ZNF285Q96NJ3 590 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 CSF3RQ99062 836 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 DCLRE1BQ9H816 532 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 LYRM4Q9HD34 91 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 MS4A12Q9NXJ0 267 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 SEMA5BQ9P283 1151 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 CES1P1Q9UKY3 287 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 PSME2Q9UL46 239 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 SPTBP11277 2137 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 AGRPO00253 132 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 RDH16O75452 317 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 MED26O95402 600 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 FOLR1P15328 257 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 NELFEP18615 380 aaKnown RBP13.88□□□□□ -0.19
CBX3-201ENST00000337620 HTR1EP28566 365 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 NTSP30990 170 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 FEN1P39748 380 aaKnown RBP13.88□□□□□ -0.19
CBX3-201ENST00000337620 SQSTM1Q13501 440 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 SPIDRQ14159 915 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 RCN1Q15293 331 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 ZNF750Q32MQ0 723 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 SHISA5Q8N114 240 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 TTC29Q8NA56 475 aaPredicted RBP13.88□□□□□ -0.19
CBX3-201ENST00000337620 ZFP90Q8TF47 636 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 SLC41A2Q96JW4 573 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 C10orf90Q96M02 699 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 SLC35A5Q9BS91 424 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 RPF2Q9H7B2 306 aaKnown RBP13.88□□□□□ -0.19
CBX3-201ENST00000337620 RNPEPL1Q9HAU8 725 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 NKX1-2Q9UD57 310 aaPredicted RBP13.88□□□□□ -0.19
CBX3-201ENST00000337620 ENTPD4Q9Y227 616 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 SPACA6W5XKT8 324 aa13.88□□□□□ -0.19
CBX3-201ENST00000337620 ARPC2O15144 300 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 OR2B3O76000 313 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 ZNF883P0CG24 379 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 CHI3L1P36222 383 aaPredicted RBP13.87□□□□□ -0.19
CBX3-201ENST00000337620 FRKP42685 505 aaPredicted RBP13.87□□□□□ -0.19
CBX3-201ENST00000337620 GRK6P43250 576 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 NCBP2P52298 156 aaKnown RBP eCLIP13.87□□□□□ -0.19
CBX3-201ENST00000337620 SIM1P81133 766 aaPredicted RBP13.87□□□□□ -0.19
CBX3-201ENST00000337620 MRPS22P82650 360 aaKnown RBP13.87□□□□□ -0.19
CBX3-201ENST00000337620 SF3A2Q15428 464 aaKnown RBP13.87□□□□□ -0.19
CBX3-201ENST00000337620 KMT5CQ86Y97 462 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 SPPL2CQ8IUH8 684 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 CCDC116Q8IYX3 515 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 CA13Q8N1Q1 262 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 ATOH1Q92858 354 aaPredicted RBP13.87□□□□□ -0.19
CBX3-201ENST00000337620 CNRIP1Q96F85 164 aaPredicted RBP13.87□□□□□ -0.19
CBX3-201ENST00000337620 RSRC1Q96IZ7 334 aaKnown RBP13.87□□□□□ -0.19
CBX3-201ENST00000337620 GLIPR2Q9H4G4 154 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 ZNF768Q9H5H4 540 aaKnown RBP13.87□□□□□ -0.19
CBX3-201ENST00000337620 CXorf36Q9H7Y0 433 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 ACSS1Q9NUB1 689 aaPredicted RBP13.87□□□□□ -0.19
CBX3-201ENST00000337620 GIMAP4Q9NUV9 329 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 ACTR3BQ9P1U1 418 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 ACSL6Q9UKU0 697 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 PCDHB3Q9Y5E6 796 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 SNX13Q9Y5W8 968 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 ZNF780BQ9Y6R6 833 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 GSTA4O15217 222 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 FOXS1O43638 330 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 FKBP6O75344 327 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 RETP07949 1114 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 ATXN8OSP0DMR3 200 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 ATP6V1B2P21281 511 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 GPC1P35052 558 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 CASP9P55211 416 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 SKP1P63208 163 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 SHC2P98077 582 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 GRM7Q14831 915 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 CYP51A1Q16850 503 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 GARNL3Q5VVW2 1013 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 PTRH1Q86Y79 214 aaKnown RBP13.87□□□□□ -0.19
CBX3-201ENST00000337620 RCBTB1Q8NDN9 531 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 OR4D9Q8NGE8 314 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 RHBDD1Q8TEB9 315 aa13.87□□□□□ -0.19
CBX3-201ENST00000337620 CNDP2Q96KP4 475 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms