RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 UMODP07911 640 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 NR2F6P10588 404 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 IGF2RP11717 2491 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 DRD2P14416 443 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 IL12AP29459 219 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 BUD31P41223 144 aaPredicted RBP16.46■□□□□ 0.23
CHGA-202ENST00000334654 ASMTP46597 345 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 ZFP36L2P47974 494 aaKnown RBP16.46■□□□□ 0.23
CHGA-202ENST00000334654 MRPL19P49406 292 aaKnown RBP16.46■□□□□ 0.23
CHGA-202ENST00000334654 C21orf58P58505 322 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 RHAGQ02094 409 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 OCA2Q04671 838 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 CLN3Q13286 438 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 DNASE1L3Q13609 305 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 GSTA3Q16772 222 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 METTL21CQ5VZV1 264 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 SCUBE1Q8IWY4 988 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 ZNF595Q8IYB9 648 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 PRSS58Q8IYP2 241 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 TMEM132CQ8N3T6 1108 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 KRTCAP2Q8N6L1 136 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 GFM2Q969S9 779 aaKnown RBP16.46■□□□□ 0.23
CHGA-202ENST00000334654 ANKRD9Q96BM1 317 aaPredicted RBP16.46■□□□□ 0.23
CHGA-202ENST00000334654 VN1R1Q9GZP7 353 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 SOX17Q9H6I2 414 aaPredicted RBP16.46■□□□□ 0.23
CHGA-202ENST00000334654 PRDM9Q9NQV7 894 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 SDR39U1Q9NRG7 319 aaPredicted RBP16.46■□□□□ 0.23
CHGA-202ENST00000334654 C14orf105Q9NVL8 296 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 PCDHGA6Q9Y5G7 932 aa16.46■□□□□ 0.23
CHGA-202ENST00000334654 IGKV3D-11A0A0A0MRZ8 115 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 C1orf226A1L170 272 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 GABRR3A8MPY1 467 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 C21orf140B9A014 251 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 PSMD12O00232 456 aaPredicted RBP16.45■□□□□ 0.22
CHGA-202ENST00000334654 AKAP10O43572 662 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 LRATO95237 230 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 FURINP09958 794 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 IDO1P14902 403 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 DDCP20711 480 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 GPX3P22352 226 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 DLSTP36957 453 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 UFM1P61960 85 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 RPS18P62269 152 aaKnown RBP16.45■□□□□ 0.22
CHGA-202ENST00000334654 PDE7AQ13946 482 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 HEPACAMQ14CZ8 416 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 UGT8Q16880 541 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 SLC48A1Q6P1K1 146 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 PLPP5Q8NEB5 264 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 OR2Y1Q8NGV0 311 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 CDC26Q8NHZ8 85 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 FAM117AQ9C073 453 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 NECTIN3Q9NQS3 549 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 C5AR2Q9P296 337 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 IL17BQ9UHF5 180 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 GPN3Q9UHW5 284 aaPredicted RBP16.45■□□□□ 0.22
CHGA-202ENST00000334654 TCFL5Q9UL49 500 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 COPG1Q9Y678 874 aaKnown RBP16.45■□□□□ 0.22
CHGA-202ENST00000334654 SPACA6W5XKT8 324 aa16.45■□□□□ 0.22
CHGA-202ENST00000334654 DMXL2Q8TDJ6 3036 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 A0A1W2PS29 197 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 FGF17O60258 216 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 TBX19O60806 448 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 CTNSO60931 367 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 LDB3O75112 727 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 CD1EP15812 388 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 TLX1P31314 330 aaPredicted RBP16.44■□□□□ 0.22
CHGA-202ENST00000334654 HSD17B7P56937 341 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 PCBP4P57723 403 aaKnown RBP16.44■□□□□ 0.22
CHGA-202ENST00000334654 IGLV3-21P80748 117 aaPredicted RBP16.44■□□□□ 0.22
CHGA-202ENST00000334654 SRSF6Q13247 344 aaKnown RBP16.44■□□□□ 0.22
CHGA-202ENST00000334654 PDCD4Q53EL6 469 aaKnown RBP16.44■□□□□ 0.22
CHGA-202ENST00000334654 ZNF385BQ569K4 471 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 QSOX2Q6ZRP7 698 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 IL22RA1Q8N6P7 574 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 SNIP1Q8TAD8 396 aaKnown RBP16.44■□□□□ 0.22
CHGA-202ENST00000334654 TANKQ92844 425 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 ZNF764Q96H86 408 aaPredicted RBP16.44■□□□□ 0.22
CHGA-202ENST00000334654 MESP1Q9BRJ9 268 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 FAIM2Q9BWQ8 316 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 GPR87Q9BY21 358 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 REEP4Q9H6H4 257 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 TAS2R7Q9NYW3 318 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 EHD3Q9NZN3 535 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 ATP6V1HQ9UI12 483 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 NXT1Q9UKK6 140 aaKnown RBP16.44■□□□□ 0.22
CHGA-202ENST00000334654 MKL2Q9ULH7 1088 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 MRPS33Q9Y291 106 aaKnown RBP16.44■□□□□ 0.22
CHGA-202ENST00000334654 PTRH2Q9Y3E5 179 aaKnown RBP16.44■□□□□ 0.22
CHGA-202ENST00000334654 MRPS18BQ9Y676 258 aaKnown RBP16.44■□□□□ 0.22
CHGA-202ENST00000334654 CELSR3Q9NYQ7 3312 aa16.44■□□□□ 0.22
CHGA-202ENST00000334654 NUP214P35658 2090 aaPredicted RBP16.44■□□□□ 0.22
CHGA-202ENST00000334654 URB1O60287 2271 aaKnown RBP16.43■□□□□ 0.22
CHGA-202ENST00000334654 BLACEA4D250 179 aa16.43■□□□□ 0.22
CHGA-202ENST00000334654 IDSB3KWA1 339 aa16.43■□□□□ 0.22
CHGA-202ENST00000334654 SCAMP2O15127 329 aaKnown RBP16.43■□□□□ 0.22
CHGA-202ENST00000334654 PRMT3O60678 531 aa16.43■□□□□ 0.22
CHGA-202ENST00000334654 CD63P08962 238 aa16.43■□□□□ 0.22
CHGA-202ENST00000334654 NCF2P19878 526 aaPredicted RBP16.43■□□□□ 0.22
CHGA-202ENST00000334654 PRPS1L1P21108 318 aa16.43■□□□□ 0.22
CHGA-202ENST00000334654 MAOAP21397 527 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 239 ms