RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 DNASE1L1P49184 302 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 SSR4P51571 173 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 RNF4P78317 190 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 RBPJQ06330 500 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 TERF2Q15554 542 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 ELAVL1Q15717 326 aaKnown RBP7.52□□□□□ -1.2
CCNC-201ENST00000326298 GRTP1Q5TC63 336 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 NIPAL1Q6NVV3 410 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 CEP128Q6ZU80 1094 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 CCDC71Q8IV32 467 aaPredicted RBP7.52□□□□□ -1.2
CCNC-201ENST00000326298 C9orf40Q8IXQ3 194 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 TEX9Q8N6V9 391 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 ARMC2Q8NEN0 867 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 TTLQ8NG68 377 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 OR2M7Q8NG81 312 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 HUS1BQ8NHY5 278 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 CDKL2Q92772 493 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 TSPAN17Q96FV3 270 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 NSUN5Q96P11 429 aaKnown RBP7.52□□□□□ -1.2
CCNC-201ENST00000326298 EFCAB11Q9BUY7 163 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 TXNDC16Q9P2K2 825 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 RNF14Q9UBS8 474 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 CLCA3PQ9Y6N3 262 aa7.52□□□□□ -1.2
CCNC-201ENST00000326298 NIPBLQ6KC79 2804 aaeCLIP7.52□□□□□ -1.21
CCNC-201ENST00000326298 NKX2-6A6NCS4 301 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 K7EPI3 171 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 CLDN4O14493 209 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 FCHO1O14526 889 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 KERAO60938 352 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 ZFAND5O76080 213 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 CLDN14O95500 239 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 LTA4HP09960 611 aaKnown RBP7.52□□□□□ -1.21
CCNC-201ENST00000326298 RFPL3SP0C7P2 107 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 PTGS2P35354 604 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 PIGAP37287 484 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 RPS13P62277 151 aaKnown RBP7.52□□□□□ -1.21
CCNC-201ENST00000326298 ETF1P62495 437 aaKnown RBP7.52□□□□□ -1.21
CCNC-201ENST00000326298 FOXO1Q12778 655 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 ASPHQ12797 758 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 SLAMF1Q13291 335 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 TBCCQ15814 346 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 PFKFB4Q16877 469 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.52□□□□□ -1.21
CCNC-201ENST00000326298 CDKL4Q5MAI5 379 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 DEPDC1Q5TB30 811 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 KHDRBS2Q5VWX1 349 aaKnown RBP7.52□□□□□ -1.21
CCNC-201ENST00000326298 LYPD8Q6UX82 237 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 RPTNQ6XPR3 784 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 TMEM64Q6YI46 380 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 MAATS1Q7Z4T9 603 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 TCAIMQ8N3R3 496 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 HORMAD2Q8N7B1 307 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 BBOF1Q8ND07 529 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 OR52B6Q8NGF0 335 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 OR5M9Q8NGP3 310 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 STAG3L4Q8TBR4 150 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 FAM57AQ8TBR7 257 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 TMEM125Q96AQ2 219 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 SDCCAG3Q96C92 435 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 MTFMTQ96DP5 389 aaKnown RBP7.52□□□□□ -1.21
CCNC-201ENST00000326298 KCNC2Q96PR1 638 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 CNPPD1Q9BV87 410 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 CNOT10Q9H9A5 744 aaKnown RBP7.52□□□□□ -1.21
CCNC-201ENST00000326298 PROK2Q9HC23 129 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 NPDC1Q9NQX5 325 aaPredicted RBP7.52□□□□□ -1.21
CCNC-201ENST00000326298 SNX15Q9NRS6 342 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 DMGDHQ9UI17 866 aaKnown RBP7.52□□□□□ -1.21
CCNC-201ENST00000326298 PPT2Q9UMR5 302 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 ERVK-11Q9UQG0 969 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 YARS2Q9Y2Z4 477 aaKnown RBP7.52□□□□□ -1.21
CCNC-201ENST00000326298 RNF11Q9Y3C5 154 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 FREM3P0C091 2139 aa7.52□□□□□ -1.21
CCNC-201ENST00000326298 A0A1W2PR48 441 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 A8MVJ9 347 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 KDM4EB2RXH2 506 aaPredicted RBP7.51□□□□□ -1.21
CCNC-201ENST00000326298 SCELO95171 688 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 NADKO95544 446 aaPredicted RBP7.51□□□□□ -1.21
CCNC-201ENST00000326298 CLPSP04118 112 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 IGKV3-11P04433 115 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 MYBL2P10244 700 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 CASQ1P31415 396 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 SSR2P43308 183 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 MAGEA5P43359 124 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 PPIAP62937 165 aaKnown RBP7.51□□□□□ -1.21
CCNC-201ENST00000326298 FOLH1Q04609 750 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 STX4Q12846 297 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 RTL6Q6ICC9 239 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 OR4C11Q6IEV9 310 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 MED27Q6P2C8 311 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 XKRXQ6PP77 449 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 HSDL2Q6YN16 418 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 LRRC70Q7Z2Q7 622 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 MYLK4Q86YV6 388 aaPredicted RBP7.51□□□□□ -1.21
CCNC-201ENST00000326298 MMP21Q8N119 569 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 NOA1Q8NC60 698 aaKnown RBP7.51□□□□□ -1.21
CCNC-201ENST00000326298 SIMC1Q8NDZ2 872 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 UBTD2Q8WUN7 234 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 SENP5Q96HI0 755 aaPredicted RBP7.51□□□□□ -1.21
CCNC-201ENST00000326298 LURAP1Q96LR2 239 aa7.51□□□□□ -1.21
CCNC-201ENST00000326298 TTTY12Q9BZ98 90 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms