RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 DENND6BQ8NEG7 585 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 CAPNS2Q96L46 248 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 BBS4Q96RK4 519 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 FNDC11Q9BVV2 318 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 ACER3Q9NUN7 267 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 KLHL42Q9P2K6 505 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 CRNNQ9UBG3 495 aaPredicted RBP12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 SSR3Q9UNL2 185 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 MAPRE3Q9UPY8 281 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 PLXNA3P51805 1871 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 WASHC1A8K0Z3 465 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 ANHXE9PGG2 379 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 PDPK1O15530 556 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 PCDH8O95206 1070 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 C8orf89P0DMQ9 161 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 DGKGP49619 791 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 MLLT1Q03111 559 aaPredicted RBP12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 FADDQ13158 208 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 BCL7AQ4VC05 210 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 MPP7Q5T2T1 576 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 WASH2PQ6VEQ5 465 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 PARS2Q7L3T8 475 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 HORMAD2Q8N7B1 307 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 FAM46DQ8NEK8 389 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 GPR151Q8TDV0 419 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 GANCQ8TET4 914 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 ARMC5Q96C12 935 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 DIRAS2Q96HU8 199 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 ART5Q96L15 291 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 GABARAPL3Q9BY60 117 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 CPEB1Q9BZB8 566 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 BRF2Q9HAW0 419 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 NEK6Q9HC98 313 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 ZCCHC3Q9NUD5 404 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 ENOPH1Q9UHY7 261 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 ZNF221Q9UK13 617 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 CARD8Q9Y2G2 431 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 GPR52Q9Y2T5 361 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 SNX11Q9Y5W9 270 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 HCFC2Q9Y5Z7 792 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 F5P12259 2224 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 H1F0P07305 194 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 OR12D1P0DN82 309 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 PRPH2P23942 346 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 SSR2P43308 183 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 ZNF45Q02386 682 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 SPHARQ15513 63 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 GPAT3Q53EU6 434 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 ZNF805Q5CZA5 627 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 KRT73Q86Y46 540 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 TRIM48Q8IWZ4 208 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 KLHL6Q8WZ60 621 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 KLK6Q92876 244 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 TSSK6Q9BXA6 273 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 CPNE5Q9HCH3 593 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 BOLA1Q9Y3E2 137 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 WASH3PC4AMC7 463 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 MYL12AP19105 171 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 PPP2R1BP30154 601 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 RPL3P39023 403 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 SLC7A9P82251 487 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 TAP2Q03519 686 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 PYDC2Q56P42 97 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 TMEM215Q68D42 235 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 PNCKQ6P2M8 343 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 NRARPQ7Z6K4 114 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 FBLIM1Q8WUP2 373 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 MAPKAP1Q9BPZ7 522 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 TRMT61BQ9BVS5 477 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 PRR14Q9BWN1 585 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 SPATA7Q9P0W8 599 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 PRAMEF25A6NGN4 478 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 FRS3O43559 492 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 PCCBP05166 539 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 CTSLP07711 333 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 CSF2RAP15509 400 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 HOXB9P17482 250 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 TNFSF8P32971 234 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 FCHO2Q0JRZ9 810 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 KRR1Q13601 381 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 NCF4Q15080 339 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 ZMAT1Q5H9K5 638 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 HENMT1Q5T8I9 393 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 C22orf42Q6IC83 251 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 NXPE4Q6UWF7 544 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 GDPD3Q7L5L3 318 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 TSEN54Q7Z6J9 526 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 LAX1Q8IWV1 398 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 PXYLP1Q8TE99 480 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 COL26A1Q96A83 441 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 CRELD1Q96HD1 420 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 DEPDC7Q96QD5 511 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 XKR8Q9H6D3 395 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 SMURF1Q9HCE7 757 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 IMP3Q9NV31 184 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 COMMD3Q9UBI1 195 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 IL20RAQ9UHF4 553 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 ISPDA4D126 451 aa12.28□□□□□ -0.44
HMGCS1-201ENST00000325110 TNFRSF21O75509 655 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms