RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 PRKYO43930 277 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 HOXB2P14652 356 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 GNRHRP30968 328 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 MAP2K3P46734 347 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 C6orf89Q6UWU4 347 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 HS3ST5Q8IZT8 346 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 PLD6Q8N2A8 252 aaKnown RBP20.22■□□□□ 0.83
RNF40-201ENST00000324685 GALNT11Q8NCW6 608 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 TMEM125Q96AQ2 219 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 BEX2Q9BXY8 128 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 BEX1Q9HBH7 125 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 PRTFDC1Q9NRG1 225 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 RFPL1O75677 317 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 C1GALT1C1LP0DN25 315 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 CD40LGP29965 261 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 TEAD2Q15562 447 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 C6orf141Q5SZD1 244 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 ZER1Q7Z7L7 766 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 RPLP0P6Q8NHW5 317 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 RANBP9Q96S59 729 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 WDR77Q9BQA1 342 aaPredicted RBP20.22■□□□□ 0.83
RNF40-201ENST00000324685 ATG5Q9H1Y0 275 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 PREBQ9HCU5 417 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 LIPT1Q9Y234 373 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 MTMR11A4FU01 709 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 EEF1E1O43324 174 aaKnown RBP20.22■□□□□ 0.83
RNF40-201ENST00000324685 NARSO43776 548 aaKnown RBP20.22■□□□□ 0.83
RNF40-201ENST00000324685 RGS9O75916 674 aaPredicted RBP20.22■□□□□ 0.83
RNF40-201ENST00000324685 OR12D1P0DN82 309 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 MAP2K4P45985 399 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 CLCN2P51788 898 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 TECRLQ5HYJ1 363 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 SH3D19Q5HYK7 790 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 C1orf94Q6P1W5 598 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 HHATLQ9HCP6 504 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 PAK1IP1Q9NWT1 392 aaPredicted RBP20.22■□□□□ 0.83
RNF40-201ENST00000324685 ST14Q9Y5Y6 855 aa20.22■□□□□ 0.83
RNF40-201ENST00000324685 CNTN5O94779 1100 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 GJA1P17302 382 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 CCNOP22674 350 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 TIA1P31483 386 aaKnown RBP eCLIP20.21■□□□□ 0.83
RNF40-201ENST00000324685 ZNF84P51523 738 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 PLP2Q04941 152 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 PPP1R3AQ16821 1122 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 IGDCC3Q8IVU1 814 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 TRAM1L1Q8N609 369 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 B8ZZF3 427 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 INPPL1O15357 1258 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 EMC8O43402 210 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 SNAP29O95721 258 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 CCND3P30281 292 aaPredicted RBP20.21■□□□□ 0.83
RNF40-201ENST00000324685 GPR143P51810 404 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 ACTA2P62736 377 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 ACTG2P63267 376 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 CCL14Q16627 93 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 CYP27C1Q4G0S4 372 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 LIPKQ5VXJ0 399 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 SMARCD2Q92925 531 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 HS6ST2Q96MM7 605 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 NFS1Q9Y697 457 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 SDHDO14521 159 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 ARRB1P49407 418 aaPredicted RBP20.21■□□□□ 0.83
RNF40-201ENST00000324685 ENTPD1P49961 510 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 ATXN7L3Q14CW9 347 aaPredicted RBP20.21■□□□□ 0.83
RNF40-201ENST00000324685 HACD2Q6Y1H2 254 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 ASCC1Q8N9N2 400 aaKnown RBP20.21■□□□□ 0.83
RNF40-201ENST00000324685 C7orf43Q8WVR3 580 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 ZNF285Q96NJ3 590 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 TAS2R3Q9NYW6 316 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 ZFR2Q9UPR6 939 aaKnown RBP20.21■□□□□ 0.83
RNF40-201ENST00000324685 PSAT1Q9Y617 370 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 TMEM14AQ9Y6G1 99 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 FCER2P06734 321 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 CELP19835 753 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 S100PP25815 95 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 NKAPLQ5M9Q1 402 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 SLC7A11Q9UPY5 501 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 IL7P13232 177 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 ACRV1P26436 265 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 HTR2AP28223 471 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 RFC2P35250 354 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 SOX2P48431 317 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 CEACAM19Q7Z692 300 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 UBQLNLQ8IYU4 475 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 GOLM1Q8NBJ4 401 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 ERVK-18Q9QC07 812 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 HSPE1-MOB4S4R3N1 261 aa20.21■□□□□ 0.83
RNF40-201ENST00000324685 VEGFDO43915 354 aa20.2■□□□□ 0.82
RNF40-201ENST00000324685 SYNGR4O95473 234 aa20.2■□□□□ 0.82
RNF40-201ENST00000324685 CD97P48960 835 aa20.2■□□□□ 0.82
RNF40-201ENST00000324685 HK3P52790 923 aa20.2■□□□□ 0.82
RNF40-201ENST00000324685 DIO3P55073 304 aa20.2■□□□□ 0.82
RNF40-201ENST00000324685 FGL1Q08830 312 aa20.2■□□□□ 0.82
RNF40-201ENST00000324685 MRPL49Q13405 166 aaKnown RBP20.2■□□□□ 0.82
RNF40-201ENST00000324685 GAS6Q14393 721 aa20.2■□□□□ 0.82
RNF40-201ENST00000324685 DHCR24Q15392 516 aa20.2■□□□□ 0.82
RNF40-201ENST00000324685 ASPGQ86U10 573 aa20.2■□□□□ 0.82
RNF40-201ENST00000324685 MARVELD2Q8N4S9 558 aa20.2■□□□□ 0.82
RNF40-201ENST00000324685 SLC39A1Q9NY26 324 aa20.2■□□□□ 0.82
RNF40-201ENST00000324685 SOX30O94993 753 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms