RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 PCDHA9Q9Y5H5 950 aa19.93■□□□□ 0.78
YBX1-201ENST00000321358 GLOD5A6NK44 160 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 VSTM2BA6NLU5 285 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 AKAP10O43572 662 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 LRATO95237 230 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 HEXBP07686 556 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 DDCP20711 480 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 DLSTP36957 453 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 HSD17B7P56937 341 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 ENDOVQ8N8Q3 282 aaKnown RBP19.92■□□□□ 0.78
YBX1-201ENST00000321358 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.92■□□□□ 0.78
YBX1-201ENST00000321358 EFHD1Q9BUP0 239 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 BRINP2Q9C0B6 783 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 REEP4Q9H6H4 257 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 PRTFDC1Q9NRG1 225 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 EHD3Q9NZN3 535 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 GPR45Q9Y5Y3 372 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 CCDC22O60826 627 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 JRKO75564 520 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 CLNS1AP54105 237 aaKnown RBP19.92■□□□□ 0.78
YBX1-201ENST00000321358 NME5P56597 212 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 STX4Q12846 297 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 DNASE1L3Q13609 305 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 PDCD4Q53EL6 469 aaKnown RBP19.92■□□□□ 0.78
YBX1-201ENST00000321358 MED25Q71SY5 747 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 SAMD14Q8IZD0 417 aaPredicted RBP19.92■□□□□ 0.78
YBX1-201ENST00000321358 ANKS4BQ8N8V4 417 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 MTERF3Q96E29 417 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 CRB3Q9BUF7 120 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 CCDC86Q9H6F5 360 aaKnown RBP19.92■□□□□ 0.78
YBX1-201ENST00000321358 SOX17Q9H6I2 414 aaPredicted RBP19.92■□□□□ 0.78
YBX1-201ENST00000321358 GPN2Q9H9Y4 310 aaPredicted RBP19.92■□□□□ 0.78
YBX1-201ENST00000321358 SDR39U1Q9NRG7 319 aaPredicted RBP19.92■□□□□ 0.78
YBX1-201ENST00000321358 GIMAP4Q9NUV9 329 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 ATAD3AQ9NVI7 634 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 PTRH2Q9Y3E5 179 aaKnown RBP19.92■□□□□ 0.78
YBX1-201ENST00000321358 MMACHCQ9Y4U1 282 aa19.92■□□□□ 0.78
YBX1-201ENST00000321358 PGRMC2O15173 223 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 CTNSO60931 367 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 SLC22A3O75751 556 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 FOLR3P41439 243 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 ATP4BP51164 291 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 EMP2P54851 167 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 MC1RQ01726 317 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 SQLEQ14534 574 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 SLC48A1Q6P1K1 146 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 RIPOR1Q6ZS17 1223 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 SHISA6Q6ZSJ9 500 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 OR4K14Q8NGD5 310 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 METTL21AQ8WXB1 218 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 PPCDCQ96CD2 204 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 PTCHD1Q96NR3 888 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 ZIM2Q9NZV7 527 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 SH3BP4Q9P0V3 963 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 C3orf18Q9UK00 162 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 UTS2RQ9UKP6 389 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 ZNF780BQ9Y6R6 833 aa19.91■□□□□ 0.78
YBX1-201ENST00000321358 AHCTF1Q8WYP5 2266 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 SYNDIG1LA6NDD5 238 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 CYC1P08574 325 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 COX7A2P14406 83 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 PIK3R1P27986 724 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 PTPN4P29074 926 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 BIKQ13323 160 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 QSOX2Q6ZRP7 698 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 CLNKQ7Z7G1 428 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 TICAM1Q8IUC6 712 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 GLB1L3Q8NCI6 653 aaPredicted RBP19.9■□□□□ 0.78
YBX1-201ENST00000321358 CCDC197Q8NCU1 140 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 ZNF248Q8NDW4 579 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 OR2Y1Q8NGV0 311 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 VN1R1Q9GZP7 353 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 LANCL2Q9NS86 450 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 SCN3AQ9NY46 2000 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 TCFL5Q9UL49 500 aa19.9■□□□□ 0.78
YBX1-201ENST00000321358 COPG1Q9Y678 874 aaKnown RBP19.9■□□□□ 0.78
YBX1-201ENST00000321358 TPRP12270 2363 aaKnown RBP19.89■□□□□ 0.77
YBX1-201ENST00000321358 LOC101059948A0A1B0GTJ6 334 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 IDSB3KWA1 339 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 SCAMP2O15127 329 aaKnown RBP19.89■□□□□ 0.77
YBX1-201ENST00000321358 PRKRAO75569 313 aaKnown RBP19.89■□□□□ 0.77
YBX1-201ENST00000321358 ERAL1O75616 437 aaKnown RBP19.89■□□□□ 0.77
YBX1-201ENST00000321358 GPR75O95800 540 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 FURINP09958 794 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 C21orf58P58505 322 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 SERTAD2Q14140 314 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 TGIF1Q15583 401 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 NSDHLQ15738 373 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 CPTPQ5TA50 214 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 KRTCAP2Q8N6L1 136 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 DNAJB14Q8TBM8 379 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 KLHL29Q96CT2 875 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 SPSB2Q99619 263 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 DKK4Q9UBT3 224 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 ENTPD4Q9Y227 616 aa19.89■□□□□ 0.77
YBX1-201ENST00000321358 GABRR3A8MPY1 467 aa19.88■□□□□ 0.77
YBX1-201ENST00000321358 IGHEP01854 428 aa19.88■□□□□ 0.77
YBX1-201ENST00000321358 MRPL19P49406 292 aaKnown RBP19.88■□□□□ 0.77
YBX1-201ENST00000321358 HNRNPFP52597 415 aaKnown RBP19.88■□□□□ 0.77
YBX1-201ENST00000321358 UFM1P61960 85 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms