RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ZNF382Q96SR6 550 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 DPYSL5Q9BPU6 564 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 HHATLQ9HCP6 504 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 TRBV2A0A0J9YWF9 115 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 GOSR2O14653 212 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 DIRAS3O95661 229 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 SELPP16109 830 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 SCNN1AP37088 669 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 ZNF674Q2M3X9 581 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 CARD16Q5EG05 197 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 GTPBP8Q8N3Z3 284 aaPredicted RBP16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 METTL7AQ9H8H3 244 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 PLEKHA3Q9HB20 300 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 OR2S2Q9NQN1 319 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 YJEFN3A6XGL0 299 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 ART1P52961 327 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 GHRHRQ02643 423 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 TMPRSS12Q86WS5 348 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 BBS10Q8TAM1 723 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 CCDC106Q9BWC9 280 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 BOLA2-SMG1P6H3BVE0 249 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 MAT2AP31153 395 aaKnown RBP16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 FGL2Q14314 439 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 TMIGD1Q6UXZ0 262 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 OR8K3Q8NH51 312 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 WFIKKN2Q8TEU8 576 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 POLDIP3Q9BY77 421 aaKnown RBP16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 SUV39H2Q9H5I1 410 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 KLHL21Q9UJP4 597 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 H3BUI4 141 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 ZNF30P17039 623 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 CD34P28906 385 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 RAB5CP51148 216 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 SPATC1Q76KD6 591 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 WDR53Q7Z5U6 358 aaPredicted RBP16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 GDPD1Q8N9F7 314 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 C2CD4AQ8NCU7 369 aaPredicted RBP16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 HOXB13Q92826 284 aaPredicted RBP16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 OSBPL2Q9H1P3 480 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 LDAHQ9H6V9 325 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 POPDC3Q9HBV1 291 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 ZNF225Q9UK10 706 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 PCDHGA2Q9Y5H1 932 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 OTOFQ9HC10 1997 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 RP1P56715 2156 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 M0R2N6 131 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 GPX6P59796 221 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 SNTB2Q13425 540 aaKnown RBP16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 PCBP2Q15366 365 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 TERB2Q8NHR7 220 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 LRCH3Q96II8 777 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 CNTNAP3BQ96NU0 1288 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 GLIS2Q9BZE0 524 aaPredicted RBP16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 TAC3Q9UHF0 121 aa16.24■□□□□ 0.19
SMCHD1-201ENST00000320876 AHSA1O95433 338 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 MAOAP21397 527 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 ALDH3B1P43353 468 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 ZNF33AQ06730 810 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 DNAAF1Q8NEP3 725 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 CDKN2AIPNLQ96HQ2 116 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 RBP7Q96R05 134 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 PTGES2Q9H7Z7 377 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 PCDHB3Q9Y5E6 796 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 ANKRD33BA6NCL7 494 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 PON2Q15165 354 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 RRAGCQ9HB90 399 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 CCM2LQ9NUG4 571 aaPredicted RBP16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 CNOT11Q9UKZ1 510 aaKnown RBP16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 CD8B2A6NJW9 211 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 KCNJ13O60928 360 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 EOMESO95936 686 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 MT-CO2P00403 227 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 CD8BP10966 210 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 NRLP54845 237 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 NTRK2Q16620 822 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 SPANXN4Q5MJ08 99 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 OR13C4Q8NGS5 318 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 COQ10AQ96MF6 247 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 SECISBP2Q96T21 854 aaKnown RBP16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 POLMQ9NP87 494 aaPredicted RBP16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 TCRBV7S3A2A0A539 114 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 SOBPA7XYQ1 873 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 ZNF850A8MQ14 1090 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 CLIC3O95833 236 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 ZNF8P17098 575 aaPredicted RBP16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 PPP1R8Q12972 351 aaKnown RBP16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 RASGRP3Q8IV61 690 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 BEST4Q8NFU0 473 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 SLC6A16Q9GZN6 736 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 CRTAC1Q9NQ79 661 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 OR4Q2P0C623 313 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 PRKACGP22612 351 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 MYF6P23409 242 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 STC1P52823 247 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 PLGLB1Q02325 96 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 SCGB2A2Q13296 93 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 MFSD13AQ14CX5 517 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 BCL2L15Q5TBC7 163 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 GOLM1Q8NBJ4 401 aa16.23■□□□□ 0.19
SMCHD1-201ENST00000320876 TMEM59LQ9UK28 342 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms