RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 CCDC60Q8IWA6 550 aaPredicted RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 GPALPP1Q8IXQ4 340 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 LGI2Q8N0V4 545 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 DNAJC22Q8N4W6 341 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 AMER3Q8N944 861 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 GPRC5AQ8NFJ5 357 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 TCP11Q8WWU5 503 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 SORCS1Q8WY21 1168 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 SGK494Q96LW2 274 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 JPH2Q9BR39 696 aaPredicted RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 KRTAP4-5Q9BYR2 181 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 ACPTQ9BZG2 426 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 SLC39A8Q9C0K1 460 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 SLCO1C1Q9NYB5 712 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 LEF1Q9UJU2 399 aaPredicted RBP3.7□□□□□ -1.82
SMCO3-201ENST00000316048 DNAJC12Q9UKB3 198 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 ACAD8Q9UKU7 415 aa3.7□□□□□ -1.82
SMCO3-201ENST00000316048 IGHV4OR15-8A0A075B7B6 117 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 SAA2-SAA4A0A096LPE2 208 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 TRAV24A0A0B4J272 114 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 GSTTP1A0A1W2PQM5 241 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF233A6NK53 670 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 KBTBD13C9JR72 458 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 ARPC2O15144 300 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 CNMDO75829 334 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 PDE9AO76083 593 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 PNPP00491 289 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 PGK2P07205 417 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 TCP1P17987 556 aaKnown RBP3.69□□□□□ -1.82
SMCO3-201ENST00000316048 VCLP18206 1134 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 GTF2H1P32780 548 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 CDKN1AP38936 164 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 NAMPTP43490 491 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 SLC26A2P50443 739 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 KIAA1024LP59773 190 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 EEF1A1P68104 462 aaKnown RBP3.69□□□□□ -1.82
SMCO3-201ENST00000316048 EMC2Q15006 297 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 SNRNP35Q16560 246 aaKnown RBP3.69□□□□□ -1.82
SMCO3-201ENST00000316048 CCDC142Q17RM4 750 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 AARDQ4LEZ3 155 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 IFI44LQ53G44 452 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 EEF1A1P5Q5VTE0 462 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 AWAT2Q6E213 333 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 C9orf47Q6ZRZ4 202 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 EID3Q8N140 333 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 MUC20Q8N307 709 aaPredicted RBP3.69□□□□□ -1.82
SMCO3-201ENST00000316048 GPD1LQ8N335 351 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 OR2T12Q8NG77 320 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 OR1J1Q8NGS3 322 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 SAP25Q8TEE9 199 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 SMG7Q92540 1137 aaKnown RBP3.69□□□□□ -1.82
SMCO3-201ENST00000316048 SNRNP40Q96DI7 357 aaKnown RBP3.69□□□□□ -1.82
SMCO3-201ENST00000316048 PIGQQ9BRB3 760 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 CBWD1Q9BRT8 395 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 POLR3FQ9H1D9 316 aaPredicted RBP3.69□□□□□ -1.82
SMCO3-201ENST00000316048 PORCNQ9H237 461 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 DHX33Q9H6R0 707 aaKnown RBP3.69□□□□□ -1.82
SMCO3-201ENST00000316048 EBF2Q9HAK2 575 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 RNPEPL1Q9HAU8 725 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 SIX2Q9NPC8 291 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 GSN-AS1Q9NRJ2 163 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 RNF14Q9UBS8 474 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 TRIM10Q9UDY6 481 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 KLK4Q9Y5K2 254 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 TEX264Q9Y6I9 313 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 V9GYY5 206 aaPredicted RBP3.69□□□□□ -1.82
SMCO3-201ENST00000316048 WDR90Q96KV7 1748 aa3.69□□□□□ -1.82
SMCO3-201ENST00000316048 A0A087X0T9 212 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 CCL15-CCL14A0A0B4J2E2 113 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 LRRIQ4A6NIV6 560 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 BTNL10A8MVZ5 291 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ANKRD63C9JTQ0 380 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 F8VVB4 439 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 F8VWA3 439 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 F8VZ95 297 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 PDHXO00330 501 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ZBTB14O43829 449 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 EXTL3O43909 919 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ERLIN1O75477 346 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 PAPSS2O95340 614 aaPredicted RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 NGFRP08138 427 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 H2AFZP0C0S5 128 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 FAM228BP0C875 321 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 TRIM49P0CI25 452 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 TRIM49CP0CI26 452 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 CCKBRP32239 447 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 DUTP33316 252 aaKnown RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ARL2P36404 184 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 CDX1P47902 265 aaPredicted RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 GCLMP48507 274 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 KHKP50053 298 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ZNF132P52740 706 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 UCP2P55851 309 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 GCNT1Q02742 428 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 LTBQ06643 244 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ILF2Q12905 390 aaKnown RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 MXD4Q14582 209 aaPredicted RBP3.68□□□□□ -1.82
SMCO3-201ENST00000316048 CCL15Q16663 113 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 ODF4Q2M2E3 257 aa3.68□□□□□ -1.82
SMCO3-201ENST00000316048 CELF3Q5SZQ8 465 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms