RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 TAAR1Q96RJ0 339 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 KIAA1683Q9H0B3 1180 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 SUV39H2Q9H5I1 410 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ACP6Q9NPH0 428 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ATP13A2Q9NQ11 1180 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 OSER1Q9NX31 292 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 RAB21Q9UL25 225 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 IRS2Q9Y4H2 1338 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 TCRBV21S2A2A0A5A6 115 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CDK2AP1O14519 115 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 MITFO75030 526 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CILPO75339 1184 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 IL18RAPO95256 599 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 NR3C1P04150 777 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 FABP3P05413 133 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 SLC11A2P49281 568 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 MFAP4P55083 255 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 TAS2R30P59541 319 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 DCST1Q5T197 706 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 PRR27Q6MZM9 219 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 C12orf54Q6X4T0 127 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 RGL4Q8IZJ4 473 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 OR56A1Q8NGH5 318 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 OR5B3Q8NH48 314 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 RPL3LQ92901 407 aaKnown RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 FBXW5Q969U6 566 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 RSAD1Q9HA92 442 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 C1GALT1Q9NS00 363 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 MRTO4Q9UKD2 239 aaKnown RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 NAALAD2Q9Y3Q0 740 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 SYNJ2O15056 1496 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 FUOMA2VDF0 154 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 A8MUI8 341 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 GCATO75600 419 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ITGB2P05107 769 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 KLK1P06870 262 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 HOXB9P17482 250 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ANXA7P20073 488 aaKnown RBP7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CCKARP32238 428 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CCR10P46092 362 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 RTP1P59025 263 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CXCL9Q07325 125 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 DUOXA1Q1HG43 343 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ALKBH6Q3KRA9 238 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 DHRS4L2Q6PKH6 230 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 USP17L6PQ6QN14 398 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 CERS6Q6ZMG9 384 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 TECPR1Q7Z6L1 1165 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ZNF410Q86VK4 478 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ZNF695Q8IW36 515 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 OR1J1Q8NGS3 322 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 TBC1D16Q8TBP0 767 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ELP4Q96EB1 424 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 FAM89AQ96GI7 184 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 TMEM74Q96NL1 305 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 PINK1Q9BXM7 581 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 FBXO8Q9NRD0 319 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ZFP57Q9NU63 452 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 ZNF586Q9NXT0 402 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 TMPRSS11EQ9UL52 423 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 GPSM3Q9Y4H4 160 aa7.37□□□□□ -1.23
LIMCH1-201ENST00000313860 VSTM5A8MXK1 200 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 LRRN3E7EW58 273 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 ATG13O75143 517 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 PDE8BO95263 885 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 C7P10643 843 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 HTR2CP28335 458 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 CSNK1G2P78368 415 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 TSTQ16762 297 aaKnown RBP7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 H3F3CQ6NXT2 135 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 HHIPL2Q6UWX4 724 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 SPOCD1Q6ZMY3 1216 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 LIAT1Q6ZQX7 453 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 OR4S2Q8NH73 311 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 SVIPQ8NHG7 77 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 FNDC8Q8TC99 324 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 ZNF775Q96BV0 537 aaPredicted RBP7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 EDA2RQ9HAV5 297 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 IL17RBQ9NRM6 502 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 NAGPAQ9UK23 515 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 RNF6Q9Y252 685 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 MAP4K5Q9Y4K4 846 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 SSH2Q76I76 1423 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 MYOM1P52179 1685 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 A0A087WZ62 844 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 POM121BA6NF01 834 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 ZNF726A6NNF4 738 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 PEX12O00623 359 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 FMO6PO60774 539 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 CA3P07451 260 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 CD3GP09693 182 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 LINC00032P0C843 101 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 GIFP27352 417 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 CSKP41240 450 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 GBX1Q14549 363 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 EXD3Q8N9H8 876 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 OR2G2Q8NGZ5 317 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 PIGXQ8TBF5 258 aa7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 ZNF582Q96NG8 517 aaPredicted RBP7.36□□□□□ -1.23
LIMCH1-201ENST00000313860 GPX7Q96SL4 187 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms