RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 A0A1W2PS29 197 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 PROM1O43490 865 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 SEMA3DO95025 777 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 AGFG2O95081 481 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 RASAL1O95294 804 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 IGKV3-11P04433 115 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 STSP08842 583 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 TSPAN8P19075 237 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 CLCN2P51788 898 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 TAS2R50P59544 299 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 TNFRSF17Q02223 184 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 AP5B1Q2VPB7 878 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 RNFT1Q5M7Z0 435 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 CHERPQ8IWX8 916 aaKnown RBP13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 OR4N5Q8IXE1 308 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 SCYL1Q96KG9 808 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 FARSBQ9NSD9 589 aaKnown RBP13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 LRFN1Q9P244 771 aa13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 PSMC3IPQ9P2W1 217 aaPredicted RBP13.58□□□□□ -0.23
PPP1CA-201ENST00000312989 A0A1W2PPM1 405 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 GOLGA8RI6L899 631 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 HRKO00198 91 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 NME2P1O60361 137 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 SMIM24O75264 130 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 CLPSP04118 112 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 UQCRHP07919 91 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 SP1P08047 785 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 NME2P22392 152 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 CPN2P22792 545 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 PTX3P26022 381 aaPredicted RBP13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 HSD17B3P37058 310 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 HLCSP50747 726 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 KCNK10P57789 538 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 ZNF678Q5SXM1 525 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 FRG2Q64ET8 278 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 GALNTL5Q7Z4T8 443 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 GPR180Q86V85 440 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 LCA5Q86VQ0 697 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 ACMSDQ8TDX5 336 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 ZNF721Q8TF20 911 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 REPS1Q96D71 796 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 FRG2BQ96QU4 278 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 DEFB126Q9BYW3 111 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 LIN28AQ9H9Z2 209 aaKnown RBP13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 KLHL1Q9NR64 748 aa13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 TEX10Q9NXF1 929 aaPredicted RBP13.58□□□□□ -0.24
PPP1CA-201ENST00000312989 ESPL1Q14674 2120 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 G3V2L1 256 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 ITGA10O75578 1167 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 AIFM1O95831 613 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 CLDN1O95832 211 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 GBAP04062 536 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 STT3AP46977 705 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 CCNG1P51959 295 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 HERVK_113P63132 956 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 FOLH1Q04609 750 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 GALNT1Q10472 559 aaPredicted RBP13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 TBL3Q12788 808 aaKnown RBP13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 SERTAD2Q14140 314 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 RCN2Q14257 317 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 TCHHL1Q5QJ38 904 aaPredicted RBP13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 TEX35Q5T0J7 233 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 HIST2H2BCQ6DN03 193 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 SLC25A25Q6KCM7 469 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 MDGA2Q7Z553 956 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 TDRPQ86YL5 185 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 MORN4Q8NDC4 146 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 OR14A16Q8NHC5 309 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 DNAJB8Q8NHS0 232 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 SLC2A12Q8TD20 617 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 THAP3Q8WTV1 239 aaPredicted RBP13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 ERVK-6Q9BXR3 956 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 RPF2Q9H7B2 306 aaKnown RBP13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 TRPS1Q9UHF7 1281 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 SLC5A6Q9Y289 635 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 MAST4O15021 2626 aa13.57□□□□□ -0.24
PPP1CA-201ENST00000312989 IQANK1A0A1B0GTG1 560 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 SYNDIG1LA6NDD5 238 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 C17orf105B2RV13 164 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 SLC25A12O75746 678 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 FAM58BPP0C7Q3 252 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 PYGBP11216 843 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 GP1BBP13224 206 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 SOX18P35713 384 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 CYB561P49447 251 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 RAP1GDS1P52306 607 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 HK2P52789 917 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 PRKAA2P54646 552 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 OC90Q02509 493 aaPredicted RBP13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 CLCQ05315 142 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 STX4Q12846 297 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 RASA2Q15283 850 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 C4orf17Q53FE4 359 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 LGSNQ5TDP6 509 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 FGD2Q7Z6J4 655 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 MILR1Q7Z6M3 343 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 NUDT13Q86X67 352 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 C9orf40Q8IXQ3 194 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 METTL4Q8N3J2 472 aa13.56□□□□□ -0.24
PPP1CA-201ENST00000312989 TMEM132CQ8N3T6 1108 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms