RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CDC14CA4D256 554 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 NKX2-8O15522 239 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 DYRK3O43781 588 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 DNAJB6O75190 326 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 JRKO75564 520 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 AIFM1O95831 613 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 GBAP04062 536 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 ITPKBP27987 946 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 RPL3P39023 403 aaKnown RBP16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 TAS2R50P59544 299 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 ERVK-8P63133 956 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 RAE1P78406 368 aaKnown RBP16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 EMX2Q04743 252 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 C6orf136Q5SQH8 315 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 OGFOD2Q6N063 350 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 SHISA6Q6ZSJ9 500 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 PPP1R32Q7Z5V6 425 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 C16orf78Q8WTQ4 265 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 TM4SF18Q96CE8 201 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 CSF3RQ99062 836 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 RBCK1Q9BYM8 510 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 P4HTMQ9NXG6 502 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 MARCOQ9UEW3 520 aaPredicted RBP16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 MAN2B2Q9Y2E5 1009 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 PCDHA9Q9Y5H5 950 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 PTGDR2Q9Y5Y4 395 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 USH1CQ9Y6N9 552 aa16.82■□□□□ 0.28
SSSCA1-201ENST00000309328 FER1L5A0AVI2 2057 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 TCP11X1B4DZS4 312 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 FAM227AF5H4B4 570 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 PEX11AO75192 247 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 HPP00738 406 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 PRR35P0CG20 571 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 KITP10721 976 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 COX7A2P14406 83 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 ALOX15P16050 662 aaPredicted RBP16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 LBPP18428 481 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 WT1P19544 449 aaPredicted RBP16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 CXADRP78310 365 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 IRX1P78414 480 aaPredicted RBP16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 IGLV3-21P80748 117 aaPredicted RBP16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 PLIN5Q00G26 463 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 SRSF6Q13247 344 aaKnown RBP16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 COL9A2Q14055 689 aaPredicted RBP16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 RFTN2Q52LD8 501 aaPredicted RBP16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 SLC48A1Q6P1K1 146 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 KIRREL2Q6UWL6 708 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 NDUFAF7Q7L592 441 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 R3HCC1LQ7Z5L2 792 aaKnown RBP16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 CPEB2Q7Z5Q1 589 aaKnown RBP16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 ACTRT2Q8TDY3 377 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 C3orf30Q96M34 536 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 LPAR4Q99677 370 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 TUBB6Q9BUF5 446 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 ZNF700Q9H0M5 742 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 AKTIPQ9H8T0 292 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 SLCO1B3Q9NPD5 702 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 ADAP2Q9NPF8 381 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 GIMAP4Q9NUV9 329 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 DLGAP4Q9Y2H0 992 aa16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 POLR3HQ9Y535 204 aaPredicted RBP16.81■□□□□ 0.28
SSSCA1-201ENST00000309328 ATP6AP2A0A1C7CYW4 349 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 SOCS6O14544 535 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 EDF1O60869 148 aaKnown RBP16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 ATP6AP2O75787 350 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 GPR75O95800 540 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 PRKAR1AP10644 381 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 DDCP20711 480 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 PIK3R1P27986 724 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 GALNSP34059 522 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 OR4D2P58180 307 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 ACTN3Q08043 901 aaPredicted RBP16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 ELAVL1Q15717 326 aaKnown RBP16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 EXT1Q16394 746 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 RIPOR1Q6ZS17 1223 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 ACAD11Q709F0 780 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 GPR155Q7Z3F1 870 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 SPATA19Q7Z5L4 167 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 ANKRD37Q7Z713 158 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 APLFQ8IW19 511 aaPredicted RBP16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 NATD1Q8N6N6 113 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 CLEC1AQ8NC01 280 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 OR11G2Q8NGC1 345 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 OR4K14Q8NGD5 310 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 CEP70Q8NHQ1 597 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 DNAJB14Q8TBM8 379 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 MTERF3Q96E29 417 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 RBM18Q96H35 190 aaKnown RBP16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 MAELQ96JY0 434 aaKnown RBP16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 EBPLQ9BY08 206 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 CPNE5Q9HCH3 593 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 MIEF1Q9NQG6 463 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 TEX10Q9NXF1 929 aaPredicted RBP16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 TAS2R7Q9NYW3 318 aa16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 G3BP2Q9UN86 482 aaKnown RBP16.8■□□□□ 0.28
SSSCA1-201ENST00000309328 IGHV1-45A0A0A0MS14 117 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 NSG1A0A0A6YYJ2 146 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 SDHDO14521 159 aa16.79■□□□□ 0.28
SSSCA1-201ENST00000309328 IL3P08700 152 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms