RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 hCG_1807616A0A1W2PRN6 198 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 TTLL8A6PVC2 850 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 ZNF705FA8MVS1 300 aaPredicted RBP12.16□□□□□ -0.46
USP38-201ENST00000307017 INMT-MINDY4F8WBC2 141 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 ABCB7O75027 752 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 ZNF705DP0CH99 300 aaPredicted RBP12.16□□□□□ -0.46
USP38-201ENST00000307017 ZNF705BP0CI00 300 aaPredicted RBP12.16□□□□□ -0.46
USP38-201ENST00000307017 C6P13671 934 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 AK4P27144 223 aaPredicted RBP12.16□□□□□ -0.46
USP38-201ENST00000307017 ZNF678Q5SXM1 525 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 KIAA1614Q5VZ46 1190 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 CARM1Q86X55 608 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 UHRF1Q96T88 793 aaPredicted RBP12.16□□□□□ -0.46
USP38-201ENST00000307017 INPP5KQ9BT40 448 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 TAS2R9Q9NYW1 312 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 SEC14L5O43304 696 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 TXNL1O43396 289 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 CYP17A1P05093 508 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 HSD17B2P37059 387 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 CLECL1Q8IZS7 167 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 CLDND1Q9NY35 253 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 DISP2A7MBM2 1401 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 AGAP5A6NIR3 686 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 SDC3O75056 442 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 IFNA2P01563 188 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 SELPP16109 830 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 POU3F4P49335 361 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 RNF175Q8N4F7 328 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 TIFAQ96CG3 184 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 TFB2MQ9H5Q4 396 aaKnown RBP12.15□□□□□ -0.46
USP38-201ENST00000307017 FBXL12Q9NXK8 326 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 PEAK1Q9H792 1746 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 PCDH17O14917 1159 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 F3P13726 295 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 PRKACAP17612 351 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 PVALBP20472 110 aaPredicted RBP12.15□□□□□ -0.46
USP38-201ENST00000307017 IRF5Q13568 498 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 ZNF791Q3KP31 576 aaPredicted RBP12.15□□□□□ -0.46
USP38-201ENST00000307017 CFL2Q9Y281 166 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 A0A1B0GVI7 797 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 A6NL46 340 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 OR2B3O76000 313 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 AMY2BP19961 511 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 TMEM225Q6GV28 225 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 OR52E2Q8NGJ4 325 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 CLEC4DQ8WXI8 215 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.15□□□□□ -0.46
USP38-201ENST00000307017 DHX33Q9H6R0 707 aaKnown RBP12.15□□□□□ -0.46
USP38-201ENST00000307017 TM9SF3Q9HD45 589 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 NFATC1O95644 943 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 KCNAB2Q13303 367 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 APOFQ13790 326 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 DEFB110Q30KQ9 67 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 METTL2BQ6P1Q9 378 aaKnown RBP12.15□□□□□ -0.46
USP38-201ENST00000307017 NUDT13Q86X67 352 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 FBXL16Q8N461 479 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 MARVELD2Q8N4S9 558 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 ZNF709Q8N972 641 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 GLYATL2Q8WU03 294 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 FAM46BQ96A09 425 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 LHPPQ9H008 270 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 FN3KQ9H479 309 aa12.15□□□□□ -0.46
USP38-201ENST00000307017 A8MVJ9 347 aa12.15□□□□□ -0.47
USP38-201ENST00000307017 HCRTR2O43614 444 aa12.15□□□□□ -0.47
USP38-201ENST00000307017 LATS1O95835 1130 aa12.15□□□□□ -0.47
USP38-201ENST00000307017 PIGRP01833 764 aa12.15□□□□□ -0.47
USP38-201ENST00000307017 ESR1P03372 595 aa12.15□□□□□ -0.47
USP38-201ENST00000307017 CD72P21854 359 aa12.15□□□□□ -0.47
USP38-201ENST00000307017 C2orf76Q3KRA6 126 aa12.15□□□□□ -0.47
USP38-201ENST00000307017 FAM69BQ5VUD6 431 aa12.15□□□□□ -0.47
USP38-201ENST00000307017 MCATQ8IVS2 390 aaKnown RBP12.15□□□□□ -0.47
USP38-201ENST00000307017 RPS10P5Q9NQ39 176 aa12.15□□□□□ -0.47
USP38-201ENST00000307017 OXSR1O95747 527 aaPredicted RBP12.14□□□□□ -0.47
USP38-201ENST00000307017 PITX1P78337 314 aaPredicted RBP12.14□□□□□ -0.47
USP38-201ENST00000307017 SLC25A11Q02978 314 aaKnown RBP12.14□□□□□ -0.47
USP38-201ENST00000307017 LTC4SQ16873 150 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 KREMEN2Q8NCW0 462 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 OR9Q2Q8NGE9 314 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 PRPS1L1P21108 318 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 OSTM1Q86WC4 334 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 DBF4BQ8NFT6 615 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 SCAMP4Q969E2 229 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 FAIMQ9NVQ4 179 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 ZDHHC3Q9NYG2 299 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 USP36Q9P275 1121 aaKnown RBP12.14□□□□□ -0.47
USP38-201ENST00000307017 CDC14AQ9UNH5 594 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 KCNIP3Q9Y2W7 256 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 PCDHGB7Q9Y5F8 929 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 TRBV2A0A0J9YWF9 115 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 CAPN5O15484 640 aaPredicted RBP12.14□□□□□ -0.47
USP38-201ENST00000307017 CSNK2A2P19784 350 aaPredicted RBP12.14□□□□□ -0.47
USP38-201ENST00000307017 PON3Q15166 354 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 DEFB115Q30KQ5 88 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 ANKRD54Q6NXT1 300 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 DEDD2Q8WXF8 326 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 GAS2L1Q99501 681 aaPredicted RBP12.14□□□□□ -0.47
USP38-201ENST00000307017 SORBS1Q9BX66 1292 aaKnown RBP12.14□□□□□ -0.47
USP38-201ENST00000307017 LRRN3E7EW58 273 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 GNRH1P01148 92 aa12.14□□□□□ -0.47
USP38-201ENST00000307017 PTPN2P17706 415 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms