RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 LDLRP01130 860 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 RPS17P08708 135 aaKnown RBP24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 COX7A2P14406 83 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 BUD31P41223 144 aaPredicted RBP24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 NEK2P51955 445 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 PMP22Q01453 160 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 TNFRSF17Q02223 184 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 TRAF3Q13114 568 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 GGTA1PQ4G0N0 100 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 TEX35Q5T0J7 233 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 ZNF468Q5VIY5 522 aaPredicted RBP24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 FRG2Q64ET8 278 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 CYP20A1Q6UW02 462 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 GFRALQ6UXV0 394 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 MILR1Q7Z6M3 343 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 TMEM151AQ8N4L1 468 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 THAP3Q8WTV1 239 aaPredicted RBP24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 ANKRD9Q96BM1 317 aaPredicted RBP24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 FRG2BQ96QU4 278 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 C1QTNF3Q9BXJ4 246 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 DDX31Q9H8H2 851 aaKnown RBP24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 SEMA4BQ9NPR2 832 aaPredicted RBP24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 SEC14L3Q9UDX4 400 aa24.63■■□□□ 1.53
CDKN2A-201ENST00000304494 ASPDHA6ND91 283 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 C17orf105B2RV13 164 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 ITGA10O75578 1167 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 SEMA3DO95025 777 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 SBK3P0C264 359 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 MST1P26927 711 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 IFT88Q13099 833 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 MAPKAPK3Q16644 382 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 HSDL2Q6YN16 418 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 GALNTL5Q7Z4T8 443 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 NUDT13Q86X67 352 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 TMEM156Q8N614 296 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 LRRN4CLQ8ND94 238 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 ACMSDQ8TDX5 336 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 ZNF483Q8TF39 744 aaPredicted RBP24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 ZNF717Q9BY31 904 aaPredicted RBP24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 L2HGDHQ9H9P8 463 aa24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 YARS2Q9Y2Z4 477 aaKnown RBP24.62■■□□□ 1.53
CDKN2A-201ENST00000304494 A0A0A6YYD5 115 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 MYOCOSA0A1B0GUC4 107 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 DYRK3O43781 588 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 FGF17O60258 216 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 NME2P1O60361 137 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 UNC5CO95185 931 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 ETHE1O95571 254 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 STSP08842 583 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 RNF224P0DH78 156 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 NME2P22392 152 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 BSGP35613 385 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 PER3P56645 1201 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 KCNK10P57789 538 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 HERVK_113P63132 956 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 IGLV3-21P80748 117 aaPredicted RBP24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 GSPT2Q8IYD1 628 aaKnown RBP24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 OR4F6Q8NGB9 312 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 MTFMTQ96DP5 389 aaKnown RBP24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 DGAT2Q96PD7 388 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 ERVK-6Q9BXR3 956 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 OR8D2Q9GZM6 311 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 EPB41L4BQ9H329 900 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 ELOVL6Q9H5J4 265 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 ATG4BQ9Y4P1 393 aa24.61■■□□□ 1.53
CDKN2A-201ENST00000304494 A0A1B0GUH1 482 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 LRRTM2O43300 516 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 PROM1O43490 865 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 EEDO75530 441 aaKnown RBP24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 FAM58BPP0C7Q3 252 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 STT3AP46977 705 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 SSR4P51571 173 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 HNRNPH2P55795 449 aaKnown RBP24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 ALDH6A1Q02252 535 aaKnown RBP24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 ID2Q02363 134 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 RBPJQ06330 500 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 C18orf63Q68DL7 685 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 MRM1Q6IN84 353 aaKnown RBP24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 MYRIPQ8NFW9 859 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 OR8K3Q8NH51 312 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 SLC2A12Q8TD20 617 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 FRMD6Q96NE9 622 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 WDR41Q9HAD4 459 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 AHSPQ9NZD4 102 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 TMEM216Q9P0N5 145 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 COPS7AQ9UBW8 275 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 PLEKHB1Q9UF11 243 aaPredicted RBP24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 KLF13Q9Y2Y9 288 aaPredicted RBP24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 ASB4Q9Y574 426 aa24.6■■□□□ 1.53
CDKN2A-201ENST00000304494 GSTA1P08263 222 aa24.59■■□□□ 1.53
CDKN2A-201ENST00000304494 PLIN5Q00G26 463 aa24.59■■□□□ 1.53
CDKN2A-201ENST00000304494 FOLH1Q04609 750 aa24.59■■□□□ 1.53
CDKN2A-201ENST00000304494 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.59■■□□□ 1.53
CDKN2A-201ENST00000304494 PNPLA5Q7Z6Z6 429 aaPredicted RBP24.59■■□□□ 1.53
CDKN2A-201ENST00000304494 ZNF227Q86WZ6 799 aa24.59■■□□□ 1.53
CDKN2A-201ENST00000304494 OR4N5Q8IXE1 308 aa24.59■■□□□ 1.53
CDKN2A-201ENST00000304494 GPALPP1Q8IXQ4 340 aa24.59■■□□□ 1.53
CDKN2A-201ENST00000304494 CYP4Z2PQ8N1L4 340 aa24.59■■□□□ 1.53
CDKN2A-201ENST00000304494 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.59■■□□□ 1.53
CDKN2A-201ENST00000304494 RBM18Q96H35 190 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms