RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 HOXB2P14652 356 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 FBLP22087 321 aaKnown RBP13.71□□□□□ -0.21
HIPK3-201ENST00000303296 CAPSQ13938 189 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 SLC14A2Q15849 920 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 HYAL4Q2M3T9 481 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 CRELD2Q6UXH1 353 aaPredicted RBP13.71□□□□□ -0.21
HIPK3-201ENST00000303296 KREMEN2Q8NCW0 462 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 TMEM234Q8WY98 164 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 TOMM40LQ969M1 308 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 MAELQ96JY0 434 aaKnown RBP13.71□□□□□ -0.21
HIPK3-201ENST00000303296 MAP3K3Q99759 626 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 OAZ3Q9UMX2 235 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 TSPAN6O43657 245 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 H6PDO95479 791 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 JUPP14923 745 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 RHOQP17081 205 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 RPL13AP40429 203 aaKnown RBP13.71□□□□□ -0.21
HIPK3-201ENST00000303296 CCNHP51946 323 aaPredicted RBP13.71□□□□□ -0.21
HIPK3-201ENST00000303296 CNPY1Q3B7I2 92 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 LIN52Q52LA3 116 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 SKA3Q8IX90 412 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 ROPN1LQ96C74 230 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 RHBDF1Q96CC6 855 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 ERVK-6Q9BXR3 956 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 MGAT4BQ9UQ53 548 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 CRYM-AS1A6NIL9 109 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 AGTR1P30556 359 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 DGKQP52824 942 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 HNF4GQ14541 408 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 FAM160A2Q8N612 972 aaPredicted RBP13.71□□□□□ -0.21
HIPK3-201ENST00000303296 SPOCK2Q92563 424 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 PRTFDC1Q9NRG1 225 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 C2orf42Q9NWW7 574 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 FNIP2Q9P278 1114 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 HPSEQ9Y251 543 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 TLR6Q9Y2C9 796 aa13.71□□□□□ -0.21
HIPK3-201ENST00000303296 DLGAP1O14490 977 aa13.71□□□□□ -0.22
HIPK3-201ENST00000303296 SCAF4O95104 1147 aaKnown RBP13.71□□□□□ -0.22
HIPK3-201ENST00000303296 IL3P08700 152 aa13.71□□□□□ -0.22
HIPK3-201ENST00000303296 XRCC1P18887 633 aaPredicted RBP13.71□□□□□ -0.22
HIPK3-201ENST00000303296 SOX3P41225 446 aa13.71□□□□□ -0.22
HIPK3-201ENST00000303296 FMO1Q01740 532 aa13.71□□□□□ -0.22
HIPK3-201ENST00000303296 ARHGAP19Q14CB8 494 aa13.71□□□□□ -0.22
HIPK3-201ENST00000303296 C3orf38Q5JPI3 329 aa13.71□□□□□ -0.22
HIPK3-201ENST00000303296 LIPKQ5VXJ0 399 aa13.71□□□□□ -0.22
HIPK3-201ENST00000303296 CCDC116Q8IYX3 515 aa13.71□□□□□ -0.22
HIPK3-201ENST00000303296 SH3RF2Q8TEC5 729 aa13.71□□□□□ -0.22
HIPK3-201ENST00000303296 DCUN1D4Q92564 292 aa13.71□□□□□ -0.22
HIPK3-201ENST00000303296 HS6ST2Q96MM7 605 aa13.71□□□□□ -0.22
HIPK3-201ENST00000303296 CREBZFQ9NS37 354 aa13.71□□□□□ -0.22
HIPK3-201ENST00000303296 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.71□□□□□ -0.22
HIPK3-201ENST00000303296 KLHL13Q9P2N7 655 aa13.71□□□□□ -0.22
HIPK3-201ENST00000303296 TRBV2A0A0J9YWF9 115 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 FMO6PO60774 539 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 F7P08709 466 aaPredicted RBP13.7□□□□□ -0.22
HIPK3-201ENST00000303296 C9orf43Q8TAL5 461 aaPredicted RBP13.7□□□□□ -0.22
HIPK3-201ENST00000303296 SLC35C1Q96A29 364 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 MOAP1Q96BY2 351 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 SCRN2Q96FV2 425 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 ZNF559Q9BR84 538 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 KCNK13Q9HB14 408 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 ZNF286AQ9HBT8 521 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 NENFQ9UMX5 172 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 PTGER3P43115 390 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 CEACAM19Q7Z692 300 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 OR4K15Q8NH41 348 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 CDC6Q99741 560 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 TAS2R9Q9NYW1 312 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 ACOT7O00154 380 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 TCAPO15273 167 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 HLA-DPB1P04440 258 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 CD72P21854 359 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 PTH2RP49190 550 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 SLC24A5Q71RS6 500 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 SORCS1Q8WY21 1168 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 L2HGDHQ9H9P8 463 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 FAM237AA0A1B0GTK4 181 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 BHLHE40O14503 412 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 SLC7A4O43246 635 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 APLNRP35414 380 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 KIAA0319Q5VV43 1072 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 TMEM71Q6P5X7 295 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 MITD1Q8WV92 249 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 THUMPD1Q9NXG2 353 aaKnown RBP13.7□□□□□ -0.22
HIPK3-201ENST00000303296 PADI3Q9ULW8 664 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 TSTD3H0UI37 97 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 P04436 131 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 RNF130Q86XS8 419 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 BPIFA2Q96DR5 249 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 SEMA6CQ9H3T2 930 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 TP53I11O14683 189 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 CD34P28906 385 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 SF3A2Q15428 464 aaKnown RBP13.7□□□□□ -0.22
HIPK3-201ENST00000303296 STRADAQ7RTN6 431 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 NEIL3Q8TAT5 605 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.7□□□□□ -0.224e-7■■■■■ 27.3
HIPK3-201ENST00000303296 PTCHD1Q96NR3 888 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 TWNKQ96RR1 684 aa13.7□□□□□ -0.22
HIPK3-201ENST00000303296 VRK1Q99986 396 aaPredicted RBP13.7□□□□□ -0.22
HIPK3-201ENST00000303296 DEFB126Q9BYW3 111 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms