RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TMEM229AB2RXF0 380 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 SNPHO15079 494 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 KMOO15229 486 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 C5AR1P21730 350 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 PTX3P26022 381 aaPredicted RBP20.89■□□□□ 0.93
TPM4-201ENST00000300933 CHI3L1P36222 383 aaPredicted RBP20.89■□□□□ 0.93
TPM4-201ENST00000300933 MAGEA2P43356 314 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 HORMAD1Q86X24 394 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 SLC44A2Q8IWA5 706 aaPredicted RBP20.89■□□□□ 0.93
TPM4-201ENST00000300933 POC5Q8NA72 575 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 TP53I13Q8NBR0 393 aaPredicted RBP20.89■□□□□ 0.93
TPM4-201ENST00000300933 UBE2FQ969M7 185 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 TRIT1Q9H3H1 467 aaKnown RBP20.89■□□□□ 0.93
TPM4-201ENST00000300933 DSN1Q9H410 356 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 SIRT5Q9NXA8 310 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 C3orf18Q9UK00 162 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 A0A1W2PRB8 838 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 PDZK1P1A8MUH7 402 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 BCKDKO14874 412 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 IGFBP5P24593 272 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 EIF3MQ7L2H7 374 aaKnown RBP20.89■□□□□ 0.93
TPM4-201ENST00000300933 RD3Q7Z3Z2 195 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 CAMKMTQ7Z624 323 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 KRT78Q8N1N4 520 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 PJA1Q8NG27 643 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 RDH12Q96NR8 316 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 BTBD2Q9BX70 525 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 BHLHE41Q9C0J9 482 aaPredicted RBP20.89■□□□□ 0.93
TPM4-201ENST00000300933 SLAMF7Q9NQ25 335 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 NECTIN3Q9NQS3 549 aa20.89■□□□□ 0.93
TPM4-201ENST00000300933 H0Y8X5 98 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 COL9A1P20849 921 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 CD6P30203 668 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 EPS8Q12929 822 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 KRT33BQ14525 404 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.88■□□□□ 0.932e-6■■■■■ 40.6
TPM4-201ENST00000300933 METTL2AQ96IZ6 378 aaKnown RBP20.88■□□□□ 0.93
TPM4-201ENST00000300933 SLC17A9Q9BYT1 436 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 TMEM184CQ9NVA4 438 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 RPS6KA6Q9UK32 745 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 IFT52Q9Y366 437 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 PCDHGA10Q9Y5H3 936 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 CEACAM5P06731 702 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 TRIM23P36406 574 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 PRIM2P49643 509 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 SMN1Q16637 294 aaKnown RBP20.88■□□□□ 0.93
TPM4-201ENST00000300933 COLEC12Q5KU26 742 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 ZNF717Q9BY31 904 aaPredicted RBP20.88■□□□□ 0.93
TPM4-201ENST00000300933 TP63Q9H3D4 680 aaPredicted RBP20.88■□□□□ 0.93
TPM4-201ENST00000300933 RUBCNLQ9H714 662 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 CLEC1BQ9P126 229 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 ZNF282Q9UDV7 671 aaPredicted RBP20.88■□□□□ 0.93
TPM4-201ENST00000300933 NAALAD2Q9Y3Q0 740 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 TESMINQ9Y4I5 508 aa20.88■□□□□ 0.93
TPM4-201ENST00000300933 SUV39H1O43463 412 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 GPR37L1O60883 481 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 PRKRAO75569 313 aaKnown RBP20.87■□□□□ 0.93
TPM4-201ENST00000300933 PIK3CBP42338 1070 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 PPP5CP53041 499 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 MAPK12P53778 367 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 PPP2CBP62714 309 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 PPP2CAP67775 309 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 KCNJ10P78508 379 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 TFF2Q03403 129 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 RPA4Q13156 261 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 ERICH5Q6P6B1 374 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 RHOXF1Q8NHV9 184 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 ZNF300Q96RE9 604 aaPredicted RBP20.87■□□□□ 0.93
TPM4-201ENST00000300933 SLIRPQ9GZT3 109 aaKnown RBP20.87■□□□□ 0.93
TPM4-201ENST00000300933 HOXD1Q9GZZ0 328 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 GLOD5A6NK44 160 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 M0QX08 132 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 KCNK2O95069 426 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 SPNP16150 400 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 LRIT3Q3SXY7 679 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 KHDRBS2Q5VWX1 349 aaKnown RBP20.87■□□□□ 0.93
TPM4-201ENST00000300933 LAIR1Q6GTX8 287 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 SHQ1Q6PI26 577 aaKnown RBP20.87■□□□□ 0.93
TPM4-201ENST00000300933 B3GNT8Q7Z7M8 397 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 HIPK1Q86Z02 1210 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 LYSMD2Q8IV50 215 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 C11orf65Q8NCR3 313 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 MCFD2Q8NI22 146 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 LGALS12Q96DT0 336 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 YIPF6Q96EC8 236 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 MARCH7Q9H992 704 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 MYNNQ9NPC7 610 aa20.87■□□□□ 0.93
TPM4-201ENST00000300933 DENND4AQ7Z401 1863 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 IGKV1-8A0A0C4DH67 115 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 POM121BA6NF01 834 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 ASNA1O43681 348 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 RNGTTO60942 597 aaKnown RBP20.86■□□□□ 0.93
TPM4-201ENST00000300933 ADH1BP00325 375 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 IGFALSP35858 605 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 MASP1P48740 699 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 ZNF776Q68DI1 518 aaPredicted RBP20.86■□□□□ 0.93
TPM4-201ENST00000300933 TSEN54Q7Z6J9 526 aaKnown RBP20.86■□□□□ 0.93
TPM4-201ENST00000300933 OXR1Q8N573 874 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 ATG16L2Q8NAA4 619 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 EXOSC8Q96B26 276 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms