RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ZNF630Q2M218 657 aaPredicted RBP13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NRROSQ86YC3 692 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PNPLA1Q8N8W4 532 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 OR5T1Q8NG75 326 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 LRRC15Q8TF66 581 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ACOT12Q8WYK0 555 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NINJ1Q92982 152 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HIF3AQ9Y2N7 669 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 IFT52Q9Y366 437 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HCN4Q9Y3Q4 1203 aa13.04□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NFKBIEO00221 500 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GABBR2O75899 941 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 BCAS2O75934 225 aaPredicted RBP13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 DLDP09622 509 aaKnown RBP13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 H2BFMP0C1H6 154 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PIK3CBP42338 1070 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ECH1Q13011 328 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 UPP1Q16831 310 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZNF404Q494X3 552 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SLC36A3Q495N2 470 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PSAPL1Q6NUJ1 521 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 LAS2Q8IYD9 372 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SMARCD2Q92925 531 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TSGA13Q96PP4 275 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ACTL8Q9H568 366 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CUEDC1Q9NWM3 386 aaPredicted RBP13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FTSJ1Q9UET6 329 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 OTOL1A6NHN0 477 aaPredicted RBP13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ABCB7O75027 752 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ARL6IP5O75915 188 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RHOP08100 348 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GLP1RP43220 463 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SLC10A2Q12908 348 aaPredicted RBP13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TRAM2Q15035 370 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CHRFAM7AQ494W8 412 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ENPP6Q6UWR7 440 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 IGFN1Q86VF2 1251 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 AKAP1Q92667 903 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 NPY6RQ99463 290 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GPR34Q9UPC5 381 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TBPL1P62380 186 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TP53INP2Q8IXH6 220 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ISOC1Q96CN7 298 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CCDC106Q9BWC9 280 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RDH8Q9NYR8 311 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MARCH4Q9P2E8 410 aaPredicted RBP13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SLC35G1Q2M3R5 365 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 USP53Q70EK8 1073 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CEACAM19Q7Z692 300 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 DCAF4L2Q8NA75 395 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 IRF7Q92985 503 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SCGB3A2Q96PL1 93 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TAS2R9Q9NYW1 312 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PCDHGA6Q9Y5G7 932 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ABHD18Q0P651 414 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SNTA1Q13424 505 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TBRG1Q3YBR2 411 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RPS26P11Q5JNZ5 115 aaPredicted RBP13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PDSS1Q5T2R2 415 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZNF773Q6PK81 442 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 TAS1R3Q7RTX0 852 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SPAG16Q8N0X2 631 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PIAS4Q8N2W9 510 aaPredicted RBP13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CXXC1Q9P0U4 656 aaPredicted RBP13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 REV1Q9UBZ9 1251 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MYOM1P52179 1685 aa13.03□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SEC14L5O43304 696 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 RNGTTO60942 597 aaKnown RBP13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CSTAP01040 98 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FBLP22087 321 aaKnown RBP13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 AK4P27144 223 aaPredicted RBP13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ZNF81P51508 661 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CDNFQ49AH0 187 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 LRFN4Q6PJG9 635 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 DPY19L3Q6ZPD9 716 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 CENPSQ8N2Z9 138 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FAM86B1Q8N7N1 296 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 THAP4Q8WY91 577 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 DDX1Q92499 740 aaKnown RBP13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 GPR62Q9BZJ7 368 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ERVK13-1Q9NX77 482 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 LRRC42Q9Y546 428 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 C2orf74A8MZ97 194 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FLRT2O43155 660 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PIM1P11309 404 aaPredicted RBP13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 OR4D1Q15615 310 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 FBXO43Q4G163 708 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ASPGQ86U10 573 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 MEX3DQ86XN8 651 aaKnown RBP13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 KLBQ86Z14 1044 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 APCDD1Q8J025 514 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SLC44A3Q8N4M1 653 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 HDAC2Q92769 488 aaKnown RBP13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 KAT6AQ92794 2004 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 SIGLEC10Q96LC7 697 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 C5AR2Q9P296 337 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 PCDH10Q9P2E7 1040 aa13.02□□□□□ -0.32
CHRFAM7A-201ENST00000299847 ADAMTS6Q9UKP5 1117 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms