RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 UBFD1O14562 309 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 C16orf59Q7L2K0 433 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 FAM71AQ8IYT1 594 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 ZDHHC12Q96GR4 267 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 DOCK4Q8N1I0 1966 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 M0R2N6 131 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 LPOP22079 712 aaPredicted RBP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 IDH3AP50213 366 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 NCBP2P52298 156 aaKnown RBP eCLIP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 TIPARPQ7Z3E1 657 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 MSI2Q96DH6 328 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 RBMXL1Q96E39 390 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 LRRC46Q96FV0 321 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 RBM18Q96H35 190 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 HSFY1Q96LI6 401 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 RHOJQ9H4E5 214 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 BPIFA1Q9NP55 256 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 TMX2Q9Y320 296 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 LSMEM2Q8N112 164 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 TXNDC15Q96J42 360 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 SLC35G5Q96KT7 338 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 TSSK3Q96PN8 268 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 CDH20Q9HBT6 801 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 FNIP2Q9P278 1114 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 NUBP2Q9Y5Y2 271 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 RBM39Q14498 530 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 GLT8D1Q68CQ7 371 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 LINC01599Q8WXQ3 324 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 DZANK1Q9NVP4 752 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 P2RX2Q9UBL9 471 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 RALYQ9UKM9 306 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 AGR2O95994 175 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 RPS12P25398 132 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 ADH7P40394 386 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 METTL7BQ6UX53 244 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 PRR22Q8IZ63 422 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 OR52H1Q8NGJ2 320 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 EMID1Q96A84 441 aaPredicted RBP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 C14orf79Q96F83 325 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 PITHD1Q9GZP4 211 aaPredicted RBP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 ADAMTS13Q76LX8 1427 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 ANK1P16157 1881 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 KRBOX1C9JBD0 128 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 F5H5P2 479 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 CELF2O95319 508 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 INHAP05111 366 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 ALAS2P22557 587 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 TAS2R30P59541 319 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 ACY1Q03154 408 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 Q1RN00 199 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 SLC8B1Q6J4K2 584 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 GPR151Q8TDV0 419 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 METTL21AQ8WXB1 218 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 SUSD6Q92537 303 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 CENPOQ9BU64 300 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 SEC61A2Q9H9S3 476 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 MRPS30Q9NP92 439 aaKnown RBP10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 MIOSQ9NXC5 875 aa10.78□□□□□ -0.68
HDGFL3-201ENST00000299633 SPATA31A5Q5VU36 1347 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 SPATA31A7Q8IWB4 1347 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 PCDH17O14917 1159 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 SLC25A14O95258 325 aaPredicted RBP10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 IL1AP01583 271 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 HLA-HP01893 362 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 ERCC1P07992 297 aaPredicted RBP10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 C6P13671 934 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 CCKBRP32239 447 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 NFE2Q16621 373 aaPredicted RBP10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 BRICD5Q6PL45 260 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 SERINC1Q9NRX5 453 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 PCDHAC2Q9Y5I4 1007 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 SNX10Q9Y5X0 201 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 PTH2RP49190 550 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 CX3CR1P49238 355 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 ARL16Q0P5N6 197 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 ASB9Q96DX5 294 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 FBXL20Q96IG2 436 aa10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 FCRL2Q96LA5 508 aaPredicted RBP10.77□□□□□ -0.68
HDGFL3-201ENST00000299633 H0YGN5 161 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 CBR1P16152 277 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 KIAA1614Q5VZ46 1190 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 CEP68Q76N32 757 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 ELMOD3Q96FG2 381 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 SUCNR1Q9BXA5 334 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 PDGFDQ9GZP0 370 aaPredicted RBP10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 EXTL2Q9UBQ6 330 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 PUS1Q9Y606 427 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 EEF1E1-BLOC1S5C9J1V9 151 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 SCDO00767 359 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 M6PRP20645 277 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 TAS2R40P59535 323 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 UBE2G2P60604 165 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 ERVK-16P61578 105 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 OGDHQ02218 1023 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 DHX33Q9H6R0 707 aaKnown RBP10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 GOLT1BQ9Y3E0 138 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 SMIM30A4D0T7 59 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 GABRA2P47869 451 aa10.77□□□□□ -0.69
HDGFL3-201ENST00000299633 BBS10Q8TAM1 723 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms