RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 DMRT3Q9NQL9 472 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 DNMT3BQ9UBC3 853 aaKnown RBP15.17■□□□□ 0.02
SMAD6-201ENST00000288840 POU2F3Q9UKI9 436 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 PCDHGA6Q9Y5G7 932 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 IRAK3Q9Y616 596 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 ZNF860A6NHJ4 632 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 PPM1DO15297 605 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 RB1P06400 928 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 PAICSP22234 425 aaKnown RBP15.17■□□□□ 0.02
SMAD6-201ENST00000288840 SSTR4P31391 388 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 SLC6A12P48065 614 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 CRISP1P54107 249 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 TAP2Q03519 686 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 MICAQ29983 383 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 VITQ6UXI7 678 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 SLCO4C1Q6ZQN7 724 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 PLEKHG7Q6ZR37 379 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 OR4N5Q8IXE1 308 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 HDDC3Q8N4P3 179 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 OR8K5Q8NH50 307 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.17■□□□□ 0.022e-10■■■■■ 58.8
SMAD6-201ENST00000288840 ALOXE3Q9BYJ1 711 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 TMEM184CQ9NVA4 438 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 CXXC1Q9P0U4 656 aaPredicted RBP15.17■□□□□ 0.02
SMAD6-201ENST00000288840 CRNNQ9UBG3 495 aaPredicted RBP15.17■□□□□ 0.02
SMAD6-201ENST00000288840 SNX11Q9Y5W9 270 aa15.17■□□□□ 0.02
SMAD6-201ENST00000288840 TRBV4-1A0A0J9YWV2 114 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 SLC16A5O15375 505 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 ENTPD6O75354 484 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 FHP07954 510 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 NPPBP16860 134 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 RGS8P57771 180 aaPredicted RBP15.16■□□□□ 0.02
SMAD6-201ENST00000288840 SLC7A9P82251 487 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 KEAP1Q14145 624 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 GINS1Q14691 196 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 SYPL1Q16563 259 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 CTF1Q16619 201 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 SLC35F1Q5T1Q4 408 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 UBTD2Q8WUN7 234 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 CLIP3Q96DZ5 547 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 ARSGQ96EG1 525 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 TRNT1Q96Q11 434 aaKnown RBP15.16■□□□□ 0.02
SMAD6-201ENST00000288840 TEFMQ96QE5 360 aaKnown RBP15.16■□□□□ 0.02
SMAD6-201ENST00000288840 FAIM2Q9BWQ8 316 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 CDH7Q9ULB5 785 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 CARD8Q9Y2G2 431 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 IDH3BO43837 385 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 OR8J2Q8NGG1 315 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 OR6Q1Q8NGQ2 317 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 FCGR1BQ92637 280 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 PTGFRNQ9P2B2 879 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 GFYI3L273 518 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 GPR37L1O60883 481 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 CAPNS1P04632 268 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 ITGAMP11215 1152 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 TIE1P35590 1138 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 GGT2P36268 569 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 MAGEA10P43363 369 aaPredicted RBP15.16■□□□□ 0.02
SMAD6-201ENST00000288840 SLC15A1P46059 708 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 CCR8P51685 355 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 CRISP3P54108 245 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 VEZF1Q14119 521 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 B3GLCTQ6Y288 498 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 HORMAD2Q8N7B1 307 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 ZNF557Q8N988 423 aaPredicted RBP15.16■□□□□ 0.02
SMAD6-201ENST00000288840 FLCNQ8NFG4 579 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 ADAMTS15Q8TE58 950 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 KLHL6Q8WZ60 621 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 DEPDC7Q96QD5 511 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 ADAP2Q9NPF8 381 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 MAN2B2Q9Y2E5 1009 aa15.16■□□□□ 0.02
SMAD6-201ENST00000288840 TMA7Q9Y2S6 64 aaKnown RBP15.16■□□□□ 0.02
SMAD6-201ENST00000288840 PSIP1O75475 530 aaKnown RBP15.15■□□□□ 0.02
SMAD6-201ENST00000288840 PDE9AO76083 593 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 JUNBP17275 347 aaPredicted RBP15.15■□□□□ 0.02
SMAD6-201ENST00000288840 CEBPBP17676 345 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 CD40LGP29965 261 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 CSTF2P33240 577 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMAD6-201ENST00000288840 ZNF750Q32MQ0 723 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 MPP7Q5T2T1 576 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 IRAK1BP1Q5VVH5 260 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 C22orf42Q6IC83 251 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 Q6ZNB5 142 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 NCCRP1Q6ZVX7 275 aaPredicted RBP15.15■□□□□ 0.02
SMAD6-201ENST00000288840 CPXM2Q8N436 756 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 OR4E2Q8NGC2 313 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 CHPT1Q8WUD6 406 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 PHF21AQ96BD5 680 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 ZNF689Q96CS4 500 aaPredicted RBP15.15■□□□□ 0.02
SMAD6-201ENST00000288840 TMED9Q9BVK6 235 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 TSSK6Q9BXA6 273 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 TRIM45Q9H8W5 580 aaPredicted RBP15.15■□□□□ 0.02
SMAD6-201ENST00000288840 PEX16Q9Y5Y5 336 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 CTSLP07711 333 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 PPP5CP53041 499 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 PLEKHM3Q6ZWE6 761 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 LAPTM4BQ86VI4 370 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 NUDT13Q86X67 352 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 ALDH16A1Q8IZ83 802 aa15.15■□□□□ 0.02
SMAD6-201ENST00000288840 FCRL4Q96PJ5 515 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms