RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 RPS10P5Q9NQ39 176 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 H7C417 338 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 HNRNPKP61978 463 aaKnown RBP eCLIP12.79□□□□□ -0.36
PRDM16-201ENST00000270722 ACTC1P68032 377 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 ACTA1P68133 377 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 RABL3Q5HYI8 236 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 ZDHHC21Q8IVQ6 265 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 GID4Q8IVV7 300 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 ZNF808Q8N4W9 903 aaPredicted RBP12.79□□□□□ -0.36
PRDM16-201ENST00000270722 TGIF2Q9GZN2 237 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 EGFL7Q9UHF1 273 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 POLHQ9Y253 713 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 DLGAP1O14490 977 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 SOCS5O75159 536 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 C8BP07358 591 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 ZNF33AQ06730 810 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 LBX2Q6XYB7 198 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 Q8N402 240 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 PACRGLQ8N7B6 248 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 TRUB1Q8WWH5 349 aaKnown RBP12.79□□□□□ -0.36
PRDM16-201ENST00000270722 NKD2Q969F2 451 aaPredicted RBP12.79□□□□□ -0.36
PRDM16-201ENST00000270722 ZBTB8AQ96BR9 441 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 HCN2Q9UL51 889 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 CNTN6Q9UQ52 1028 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 ACP5P13686 325 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 PSMA6P60900 246 aaKnown RBP12.79□□□□□ -0.36
PRDM16-201ENST00000270722 DNASE1L3Q13609 305 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 SDHAF4Q5VUM1 108 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 ABHD15Q6UXT9 468 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 ST7LQ8TDW4 575 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 ST6GALNAC4Q9H4F1 302 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 IL20Q9NYY1 176 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 TGM5O43548 720 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 RBMXP38159 391 aaKnown RBP12.79□□□□□ -0.36
PRDM16-201ENST00000270722 RPP30P78346 268 aaKnown RBP12.79□□□□□ -0.36
PRDM16-201ENST00000270722 TMEM198Q66K66 360 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 SIMC1Q8NDZ2 872 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 NTAN1Q96AB6 310 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 U3KQV3 271 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 C17orf113A0A1B0GUU1 675 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 DENRO43583 198 aaKnown RBP12.79□□□□□ -0.36
PRDM16-201ENST00000270722 TSPAN6O43657 245 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 RFPL2O75678 378 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 IFNA5P01569 189 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 HOXD8P13378 290 aaPredicted RBP12.79□□□□□ -0.36
PRDM16-201ENST00000270722 RAC2P15153 192 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 ENTPD1P49961 510 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 UPP1Q16831 310 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 GLT8D1Q68CQ7 371 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 TRAM1L1Q8N609 369 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 HEBP1Q9NRV9 189 aa12.79□□□□□ -0.36
PRDM16-201ENST00000270722 SPATA6Q9NWH7 488 aaPredicted RBP12.79□□□□□ -0.36
PRDM16-201ENST00000270722 NOP16Q9Y3C1 178 aaKnown RBP12.79□□□□□ -0.36
PRDM16-201ENST00000270722 LOC100509620A0A075B734 347 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 ARVCFO00192 962 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 EIF1AYO14602 144 aaKnown RBP12.78□□□□□ -0.36
PRDM16-201ENST00000270722 SMAD9O15198 467 aaKnown RBP12.78□□□□□ -0.36
PRDM16-201ENST00000270722 KCNK2O95069 426 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 VIPR1P32241 457 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 EIF1AXP47813 144 aaKnown RBP12.78□□□□□ -0.36
PRDM16-201ENST00000270722 NIPAL3Q6P499 406 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 RSPRY1Q96DX4 576 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 OSBPL7Q9BZF2 842 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 POLR2J2Q9GZM3 115 aaKnown RBP12.78□□□□□ -0.36
PRDM16-201ENST00000270722 CDH22Q9UJ99 828 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 DIP2BQ9P265 1576 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 E9PCH4 1651 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 FFAR2O15552 330 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 ICMTO60725 284 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 INMTO95050 263 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 HNRNPA1P09651 372 aaKnown RBP eCLIP12.78□□□□□ -0.36
PRDM16-201ENST00000270722 CLCNKAP51800 687 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 GBX1Q14549 363 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 FRG2Q64ET8 278 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 SLC2A7Q6PXP3 512 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 ZNF783Q6ZMS7 281 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 KDM1BQ8NB78 822 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 FRG2BQ96QU4 278 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 CNTN3Q9P232 1028 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 FAM96BQ9Y3D0 163 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 CMAHPQ9Y471 501 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 BCL9O00512 1426 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 MAN2A2P49641 1150 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 ZNF611Q8N823 705 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 MTG2Q9H4K7 406 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 LIPT1Q9Y234 373 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 SVILO95425 2214 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 FSCN2O14926 492 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 NPNTQ6UXI9 565 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 HSD17B14Q9BPX1 270 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 NPAP1Q9NZP6 1156 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 CD3GP09693 182 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 FMO1Q01740 532 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 KDELC1Q6UW63 502 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 NLRP8Q86W28 1048 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 FRS2Q8WU20 508 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 ZFP3Q96NJ6 502 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 GLTPQ9NZD2 209 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 CXCR6O00574 342 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms