RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 RHBGQ9H310 441 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 NECTIN3Q9NQS3 549 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 HCN2Q9UL51 889 aa12.27□□□□□ -0.44
CPSF6-201ENST00000266679 A0A0G2JN53 185 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 C19orf67A6NJJ6 358 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 C5orf58C9J3I9 102 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 H7BY64 318 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 NDUFS4O43181 175 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 MRPS14O60783 128 aaKnown RBP12.27□□□□□ -0.45
CPSF6-201ENST00000266679 CCNB2O95067 398 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 GADD45GO95257 159 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 RPN2P04844 631 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 BCHEP06276 602 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 SLC35G4P0C7Q5 338 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 CD36P16671 472 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 BSGP35613 385 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 TGFBR2P37173 567 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 CCR8P51685 355 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 CLCNKAP51800 687 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 MANFP55145 182 aaKnown RBP12.27□□□□□ -0.45
CPSF6-201ENST00000266679 ITGADQ13349 1161 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 ZNF846Q147U1 533 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 PDGFRLQ15198 375 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 TMEM31Q5JXX7 168 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.27□□□□□ -0.45
CPSF6-201ENST00000266679 BTLAQ7Z6A9 289 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 ADCK1Q86TW2 530 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 ARMC8Q8IUR7 673 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 CENPSQ8N2Z9 138 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 EXOSC8Q96B26 276 aaKnown RBP12.27□□□□□ -0.45
CPSF6-201ENST00000266679 TM4SF18Q96CE8 201 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 PRAP1Q96NZ9 151 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 SIGLEC11Q96RL6 698 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 ZNF556Q9HAH1 456 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 PALMDQ9NP74 551 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 MBNL1Q9NR56 388 aaKnown RBP12.27□□□□□ -0.45
CPSF6-201ENST00000266679 TBCCD1Q9NVR7 557 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 ZNF226Q9NYT6 803 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 DUSP12Q9UNI6 340 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 ICKQ9UPZ9 632 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 FAM32AQ9Y421 112 aaKnown RBP12.27□□□□□ -0.45
CPSF6-201ENST00000266679 OR1A2Q9Y585 309 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 SNX11Q9Y5W9 270 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 MYO10Q9HD67 2058 aa12.27□□□□□ -0.45
CPSF6-201ENST00000266679 FAM227AF5H4B4 570 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 CAPN5O15484 640 aaPredicted RBP12.26□□□□□ -0.45
CPSF6-201ENST00000266679 SEMA3DO95025 777 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 RECKO95980 971 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 SERPIND1P05546 499 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 DRD3P35462 400 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 TAS2R38P59533 333 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 SYT16Q17RD7 645 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 SPDYE7PQ495Y7 208 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 METRNLQ641Q3 311 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 SAXO2Q658L1 398 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 REEP3Q6NUK4 255 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 SYCE2Q6PIF2 218 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 DCDC5Q6ZRR9 648 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 ADCK2Q7Z695 626 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 PLD3Q8IV08 490 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 DNAJC22Q8N4W6 341 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 AQP11Q8NBQ7 271 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 OR5P2Q8WZ92 322 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 SMPDL3AQ92484 453 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 GGHQ92820 318 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 KLK6Q92876 244 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 RAB7BQ96AH8 199 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 COX4I2Q96KJ9 171 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 OSGEPL1Q9H4B0 414 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 WASH6PQ9NQA3 447 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 ACER3Q9NUN7 267 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 THAP10Q9P2Z0 257 aaPredicted RBP12.26□□□□□ -0.45
CPSF6-201ENST00000266679 PSORS1C1Q9UIG5 152 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.26□□□□□ -0.45
CPSF6-201ENST00000266679 ENPP4Q9Y6X5 453 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 USP34Q70CQ2 3546 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 A0A1W2PPV9 198 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 CLDN25C9JDP6 229 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 LATO43561 262 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 OR1F1O43749 312 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 STATHP02808 62 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 IFNW1P05000 195 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 OCM2P0CE71 109 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 OCMP0CE72 109 aaPredicted RBP12.26□□□□□ -0.45
CPSF6-201ENST00000266679 ACP5P13686 325 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 ZNF12P17014 697 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 CXCR2P25025 360 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 C21orf33P30042 268 aaPredicted RBP12.26□□□□□ -0.45
CPSF6-201ENST00000266679 ARHGAP19Q14CB8 494 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 DUSP7Q16829 419 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 DGUOKQ16854 277 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 UBE2UQ5VVX9 321 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 TANGO2Q6ICL3 276 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 ANKRD54Q6NXT1 300 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 PAGE2Q7Z2X7 111 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 ZNF605Q86T29 641 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 ZNF554Q86TJ5 538 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 SLC30A8Q8IWU4 369 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 NLGN4XQ8N0W4 816 aa12.26□□□□□ -0.45
CPSF6-201ENST00000266679 TAGAPQ8N103 731 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms