RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 ACOT9Q9Y305 439 aa9.05□□□□□ -0.96
VPS41-201ENST00000265745 MEMO1Q9Y316 297 aa9.05□□□□□ -0.96
VPS41-201ENST00000265745 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.05□□□□□ -0.96
VPS41-201ENST00000265745 CLCA3PQ9Y6N3 262 aa9.05□□□□□ -0.96
VPS41-201ENST00000265745 ZGRF1Q86YA3 2104 aa9.05□□□□□ -0.96
VPS41-201ENST00000265745 NUP210LQ5VU65 1888 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 SCN3AQ9NY46 2000 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 MYOCOSA0A1B0GUC4 107 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 ESYT3A0FGR9 886 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 CCDC189A1A4V9 331 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 SYNDIG1LA6NDD5 238 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 SUPT3HB4E1H0 165 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 K7EPI3 171 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 UBXN8O00124 270 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 RTCAO00442 366 aaKnown RBP9.04□□□□□ -0.96
VPS41-201ENST00000265745 ADAM10O14672 748 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 ZNHIT1O43257 154 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 SUPT3HO75486 399 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 OR2J2O76002 312 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 SCELO95171 688 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 TGFB1P01137 390 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 IFNA16P05015 189 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 C2P06681 752 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 HIST1H1TP22492 207 aaPredicted RBP9.04□□□□□ -0.96
VPS41-201ENST00000265745 MEOX1P50221 254 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 SSR4P51571 173 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 HSF1Q00613 529 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 STX4Q12846 297 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 BMPR2Q13873 1038 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 SLMAPQ14BN4 828 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 AP5B1Q2VPB7 878 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 DEPDC1Q5TB30 811 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 MROH9Q5TGP6 573 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 MED27Q6P2C8 311 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 CHSY3Q70JA7 882 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 CCDC91Q7Z6B0 441 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 DOLPP1Q86YN1 238 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 CENPLQ8N0S6 344 aaPredicted RBP9.04□□□□□ -0.96
VPS41-201ENST00000265745 CYP4Z2PQ8N1L4 340 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 ZFP62Q8NB50 900 aaPredicted RBP9.04□□□□□ -0.96
VPS41-201ENST00000265745 MORN4Q8NDC4 146 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 OR7G3Q8NG95 312 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 C16orf52Q8NHV5 167 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 RHEBL1Q8TAI7 183 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 DAZLQ92904 295 aaKnown RBP9.04□□□□□ -0.96
VPS41-201ENST00000265745 MAPKAP1Q9BPZ7 522 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 CCDC77Q9BR77 488 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 LIN28AQ9H9Z2 209 aaKnown RBP9.04□□□□□ -0.96
VPS41-201ENST00000265745 TIMMDC1Q9NPL8 285 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 ZDHHC18Q9NUE0 388 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 MYOTQ9UBF9 498 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 OPTCQ9UBM4 332 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 CACNA1DQ01668 2161 aa9.04□□□□□ -0.96
VPS41-201ENST00000265745 A0A087X1B8 175 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 SYCE1LA8MT33 242 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 E9PLN8 166 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 PRRG2O14669 202 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 LDB3O75112 727 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 SH3BGRLO75368 114 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 PCNAP12004 261 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 ABOP16442 354 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 EPB42P16452 691 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 SERPINB1P30740 379 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 PTGER1P34995 402 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 RFC3P40938 356 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 PIK3CBP42338 1070 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 SMSP52788 366 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 GPR85P60893 370 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 SLC7A5Q01650 507 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 SERTAD2Q14140 314 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 ACAP2Q15057 778 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 CDSNQ15517 529 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 FAM83EQ2M2I3 478 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 KHDRBS2Q5VWX1 349 aaKnown RBP9.03□□□□□ -0.96
VPS41-201ENST00000265745 CRYBG3Q68DQ2 2970 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 OR4C11Q6IEV9 310 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 MYO7BQ6PIF6 2116 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 HSDL2Q6YN16 418 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 MCEMP1Q8IX19 187 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 GPALPP1Q8IXQ4 340 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 SRRM1Q8IYB3 904 aaKnown RBP9.03□□□□□ -0.96
VPS41-201ENST00000265745 TEX9Q8N6V9 391 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 ZNF321PQ8N8H1 164 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 OR8K3Q8NH51 312 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 OR14A16Q8NHC5 309 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 HUS1BQ8NHY5 278 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 AGAP11Q8TF27 550 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 KCTD4Q8WVF5 259 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 ANKRD9Q96BM1 317 aaPredicted RBP9.03□□□□□ -0.96
VPS41-201ENST00000265745 CMTM7Q96FZ5 175 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 GPR78Q96P69 363 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 VKORC1Q9BQB6 163 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 LRRC1Q9BTT6 524 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 OR8D2Q9GZM6 311 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 OR51B5Q9H339 312 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 RUBCNLQ9H714 662 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 DEPPQ9NTK1 212 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 ADGRE2Q9UHX3 823 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 ERVK-11Q9UQG0 969 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 TSC22D4Q9Y3Q8 395 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms