RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 HMGA1P17096 107 aaKnown RBP12.39□□□□□ -0.43
SNX1-201ENST00000261889 MYL9P24844 172 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 NSG1P42857 185 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 PRKCDQ05655 676 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 RUNX1T1Q06455 604 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 PUM1Q14671 1186 aaKnown RBP eCLIP12.39□□□□□ -0.43
SNX1-201ENST00000261889 CDK10Q15131 360 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 SPHARQ15513 63 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 FLYWCH1Q4VC44 716 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 SYTL3Q4VX76 610 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 PDZD3Q86UT5 571 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 OR4D11Q8NGI4 311 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 DACT3Q96B18 629 aaPredicted RBP12.39□□□□□ -0.43
SNX1-201ENST00000261889 MTERF3Q96E29 417 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 SLC6A18Q96N87 628 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 PTPRSQ13332 1948 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 ASCC3Q8N3C0 2202 aaKnown RBP12.39□□□□□ -0.43
SNX1-201ENST00000261889 A8MUA0 341 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 SGTAO43765 313 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 CSF3P09919 207 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 ZNF8P17098 575 aaPredicted RBP12.39□□□□□ -0.43
SNX1-201ENST00000261889 CYP2A7P20853 494 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 UQCRC1P31930 480 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 AVPR1BP47901 424 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 SMSP52788 366 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 BTBD16Q32M84 506 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 RNF180Q86T96 592 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 OR5H6Q8NGV6 325 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 CCDC120Q96HB5 630 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 SLC29A3Q9BZD2 475 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 UCK2Q9BZX2 261 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 ZNF334Q9HCZ1 680 aaPredicted RBP12.39□□□□□ -0.43
SNX1-201ENST00000261889 LRFN2Q9ULH4 789 aa12.39□□□□□ -0.43
SNX1-201ENST00000261889 H7C0S8 307 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 TLR4O00206 839 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 PRKYO43930 277 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 DNAJB5O75953 348 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 GABRB1P18505 474 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 MVDP53602 400 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 CRTC2Q53ET0 693 aaPredicted RBP12.38□□□□□ -0.43
SNX1-201ENST00000261889 FRMPD2BQ6IN97 320 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 HSD11B1LQ7Z5J1 315 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 ENKURQ8TC29 256 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 KAT2AQ92830 837 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 HTATIP2Q9BUP3 242 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 TSSK6Q9BXA6 273 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 MIXL1Q9H2W2 232 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 DYRK4Q9NR20 520 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 EIF3FO00303 357 aaPredicted RBP12.38□□□□□ -0.43
SNX1-201ENST00000261889 HPGDSO60760 199 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 ZNF821O75541 412 aaPredicted RBP12.38□□□□□ -0.43
SNX1-201ENST00000261889 XPAP23025 273 aaPredicted RBP12.38□□□□□ -0.43
SNX1-201ENST00000261889 ETV5P41161 510 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 MAGEA11P43364 429 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 ETV1P50549 477 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 CTBP2P56545 445 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 HYAL2Q12891 473 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 GCNT6Q5T4J0 391 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 PLAG1Q6DJT9 500 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 COMMD6Q7Z4G1 85 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 OR6C4Q8NGE1 309 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 OR52P1PQ8NH57 321 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 JPH3Q8WXH2 748 aaPredicted RBP12.38□□□□□ -0.43
SNX1-201ENST00000261889 EXOSC8Q96B26 276 aaKnown RBP12.38□□□□□ -0.43
SNX1-201ENST00000261889 NACC2Q96BF6 587 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 UROC1Q96N76 676 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 RIOK2Q9BVS4 552 aaKnown RBP12.38□□□□□ -0.43
SNX1-201ENST00000261889 GABARAPL3Q9BY60 117 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 CLN6Q9NWW5 311 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 CFAP97Q9P2B7 532 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 RIMKLBQ9ULI2 386 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 C1orf226A1L170 272 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 IL3P08700 152 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 OR56A5P0C7T3 313 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 JUPP14923 745 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 CRISP1P54107 249 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 ZNF91Q05481 1191 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 SLBPQ14493 270 aaKnown RBP eCLIP12.38□□□□□ -0.43
SNX1-201ENST00000261889 CEACAM20Q6UY09 585 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 CSGALNACT1Q8TDX6 532 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 PHF21AQ96BD5 680 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 EGLN3Q9H6Z9 239 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 CCDC177Q9NQR7 707 aaPredicted RBP12.38□□□□□ -0.43
SNX1-201ENST00000261889 MCUBQ9NWR8 336 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 CFL2Q9Y281 166 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 PCDHB7Q9Y5E2 793 aa12.38□□□□□ -0.43
SNX1-201ENST00000261889 SCN3AQ9NY46 2000 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 CD8B2A6NJW9 211 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 GTPBP1O00178 669 aaKnown RBP12.37□□□□□ -0.43
SNX1-201ENST00000261889 MYL12BO14950 172 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 ICMTO60725 284 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 CD8BP10966 210 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 MAPK1P28482 360 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 SRSF11Q05519 484 aaKnown RBP12.37□□□□□ -0.43
SNX1-201ENST00000261889 E2F2Q14209 437 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 TATDN3Q17R31 274 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 MACC1Q6ZN28 852 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 ANKRD33Q7Z3H0 272 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 GRPEL2Q8TAA5 225 aa12.37□□□□□ -0.43
SNX1-201ENST00000261889 BBS10Q8TAM1 723 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms