RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 HCN3Q9P1Z3 774 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 TCFL5Q9UL49 500 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 MAPRE3Q9UPY8 281 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 EIF3LQ9Y262 564 aaKnown RBP10.92□□□□□ -0.66
PFDN1-201ENST00000261813 CCT8L1PA6NM43 557 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 K7ENP7 123 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 SAP18O00422 153 aaKnown RBP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 RTCAO00442 366 aaKnown RBP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 NKX2-8O15522 239 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 CREG1O75629 220 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 SEMA3DO95025 777 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 UMODP07911 640 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 PRR35P0CG20 571 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 IDO1P14902 403 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 NCF2P19878 526 aaPredicted RBP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 PLA2G16P53816 162 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 UCNP55089 124 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 BTN3A2P78410 334 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 TGM3Q08188 693 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 SF3A3Q12874 501 aaKnown RBP eCLIP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 AP5B1Q2VPB7 878 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 TMEM35AQ53FP2 167 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 SPIN4Q56A73 249 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 VWA2Q5GFL6 755 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 ATP1A1-AS1Q5TC04 95 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 FAM91A1Q658Y4 838 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 TRIM40Q6P9F5 258 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 INO80CQ6PI98 192 aaPredicted RBP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 ZNF793Q6ZN11 406 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 SHISA6Q6ZSJ9 500 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 Q6ZSR9 355 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 MTDHQ86UE4 582 aaKnown RBP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 ZC3H7AQ8IWR0 971 aaKnown RBP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 CPSF7Q8N684 471 aaKnown RBP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 PLPP7Q8NBV4 271 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 OR51Q1Q8NH59 317 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 STT3BQ8TCJ2 826 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 PPP1R36Q96LQ0 422 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 OR52B2Q96RD2 323 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 HBEGFQ99075 208 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 YIPF2Q9BWQ6 316 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 SORBS1Q9BX66 1292 aaKnown RBP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 SOX17Q9H6I2 414 aaPredicted RBP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 WDR54Q9H977 334 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 LRTM1Q9HBL6 345 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 PRDM7Q9NQW5 492 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 NOP53Q9NZM5 478 aaKnown RBP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 TRPC4Q9UBN4 977 aa10.91□□□□□ -0.66
PFDN1-201ENST00000261813 ZNF282Q9UDV7 671 aaPredicted RBP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 PTRH2Q9Y3E5 179 aaKnown RBP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 URB1O60287 2271 aaKnown RBP10.91□□□□□ -0.66
PFDN1-201ENST00000261813 ATP6AP2A0A1C7CYW4 349 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 SLC35F4A4IF30 521 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 POM121CA8CG34 1229 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 ZNF891A8MT65 544 aaPredicted RBP10.9□□□□□ -0.66
PFDN1-201ENST00000261813 E9PBE3 544 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 PLPP1O14494 284 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 FCHO1O14526 889 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 LSM1O15116 133 aaKnown RBP10.9□□□□□ -0.66
PFDN1-201ENST00000261813 ATXN7O15265 892 aaPredicted RBP10.9□□□□□ -0.66
PFDN1-201ENST00000261813 CHST10O43529 356 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 KLHL41O60662 606 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 PEX11AO75192 247 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 SEC22BO75396 215 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 JRKO75564 520 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 ATP6AP2O75787 350 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 ATP5HO75947 161 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 JUNP05412 331 aaKnown RBP10.9□□□□□ -0.66
PFDN1-201ENST00000261813 CD63P08962 238 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 FURINP09958 794 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 ZGLP1P0C6A0 271 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 PRPS2P11908 318 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 CERS1P27544 350 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 XCR1P46094 333 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 MRPL19P49406 292 aaKnown RBP10.9□□□□□ -0.66
PFDN1-201ENST00000261813 EFNA3P52797 238 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 CXADRP78310 365 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 OCA2Q04671 838 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 RUNX2Q13950 521 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 ERV3-1Q14264 604 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 SQLEQ14534 574 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 C6orf136Q5SQH8 315 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 NIPAL1Q6NVV3 410 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 PAGE2Q7Z2X7 111 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 PRSS58Q8IYP2 241 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 CA13Q8N1Q1 262 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 FNDC5Q8NAU1 212 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 LSM14AQ8ND56 463 aaKnown RBP10.9□□□□□ -0.66
PFDN1-201ENST00000261813 OR2Y1Q8NGV0 311 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 ADAMTS17Q8TE56 1095 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 MIEF2Q96C03 454 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 PEX11GQ96HA9 241 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 C3orf30Q96M34 536 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 KCNC2Q96PR1 638 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 ZNF717Q9BY31 904 aaPredicted RBP10.9□□□□□ -0.66
PFDN1-201ENST00000261813 TGIF2Q9GZN2 237 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 MKKSQ9NPJ1 570 aaPredicted RBP10.9□□□□□ -0.66
PFDN1-201ENST00000261813 SAR1AQ9NR31 198 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 SIRT5Q9NXA8 310 aa10.9□□□□□ -0.66
PFDN1-201ENST00000261813 ASIC5Q9NY37 505 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms