RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 TCEANCQ8N8B7 351 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 KIAA1958Q8N8K9 716 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 ZNF480Q8WV37 535 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 PIP5K1AQ99755 562 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 POLR2J2Q9GZM3 115 aaKnown RBP13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 SPNS1Q9H2V7 528 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 STOML2Q9UJZ1 356 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 H3BQ06 376 aaPredicted RBP13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 ATG13O75143 517 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 CSF2P04141 144 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 IL3P08700 152 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 RPS19P39019 145 aaKnown RBP13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 CRISP1P54107 249 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 RUNX1T1Q06455 604 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 HSPB3Q12988 150 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 SP140Q13342 867 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 FBXO43Q4G163 708 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 SPIN4Q56A73 249 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 CCDC149Q6ZUS6 474 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 GPR151Q8TDV0 419 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 CHTF18Q8WVB6 975 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 ZNF486Q96H40 463 aaPredicted RBP13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 TXNDC15Q96J42 360 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 LYSMD1Q96S90 227 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 TVP23BQ9NYZ1 205 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 MUTYHQ9UIF7 546 aa13.81□□□□□ -0.2
SFSWAP-201ENST00000261674 IGLV3-16A0A075B6K0 115 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 H0YIV9 168 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 PLK4O00444 970 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 GSTM1P09488 218 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 NANOGNBQ7Z5D8 188 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 OR52N2Q8NGI0 321 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 GEMIN6Q8WXD5 167 aaKnown RBP13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 TIFAQ96CG3 184 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 TRMT2BQ96GJ1 504 aaKnown RBP13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 HHIPQ96QV1 700 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 CTRCQ99895 268 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 HOXD1Q9GZZ0 328 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 TAS2R9Q9NYW1 312 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 PCDHGA3Q9Y5H0 932 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 DNMT3AQ9Y6K1 912 aaPredicted RBP13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 SNX4O95219 450 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 PTTG1O95997 202 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 MVDP53602 400 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 CDC20Q12834 499 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 GRIN2CQ14957 1233 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 TTC23LQ6PF05 361 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 CAMKK1Q8N5S9 505 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 OR9Q1Q8NGQ5 310 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 C16orf78Q8WTQ4 265 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 PRRG3Q9BZD7 231 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 PLCXD1Q9NUJ7 323 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 TOR4AQ9NXH8 423 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 ITGB1BP2Q9UKP3 347 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 CFL2Q9Y281 166 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 PCM1Q15154 2024 aa13.8□□□□□ -0.2
SFSWAP-201ENST00000261674 MRPS14O60783 128 aaKnown RBP13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 STATHP02808 62 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 MANFP55145 182 aaKnown RBP13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 TIMM50Q3ZCQ8 353 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 TCEAL5Q5H9L2 206 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 C1QTNF12Q5T7M4 302 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 HIST2H2AA3Q6FI13 130 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 CASP12Q6UXS9 341 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 TMPRSS11AQ6ZMR5 421 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 LAX1Q8IWV1 398 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 OR2A12Q8NGT7 310 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 NLNQ9BYT8 704 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 SLC6A16Q9GZN6 736 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 ABCG4Q9H172 646 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 OR2AG1Q9H205 316 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 MMP28Q9H239 520 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 CHST8Q9H2A9 424 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 ANKHQ9HCJ1 492 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 ABCB9Q9NP78 766 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 DYRK4Q9NR20 520 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 C1GALT1Q9NS00 363 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 KLHL3Q9UH77 587 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 ZNF221Q9UK13 617 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 TLR4O00206 839 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 RNASET2O00584 256 aaKnown RBP13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 SLC16A5O15375 505 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 LRRTM2O43300 516 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 TNFRSF21O75509 655 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 SLCO2B1O94956 709 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 AP2A2O94973 939 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 IFNA14P01570 189 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 ELFN1P0C7U0 828 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 SSTR4P31391 388 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 PRKAG1P54619 331 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 PRKCDQ05655 676 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 TARDBPQ13148 414 aaKnown RBP eCLIP13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 PRSS53Q2L4Q9 553 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 MPEG1Q2M385 716 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 PLAG1Q6DJT9 500 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 TUBA3EQ6PEY2 450 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 SLCO4C1Q6ZQN7 724 aa13.79□□□□□ -0.2
SFSWAP-201ENST00000261674 WDR53Q7Z5U6 358 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms