RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 EXOSC1Q9Y3B2 195 aaKnown RBP11.62□□□□□ -0.55
COL8A1-201ENST00000261037 TIMM8BQ9Y5J9 83 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-201ENST00000261037 FAM227AF5H4B4 570 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 PRSS56P0CW18 603 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 CD97P48960 835 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 RGS19P49795 217 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 PLCXD2Q0VAA5 305 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 SLC10A2Q12908 348 aaPredicted RBP11.62□□□□□ -0.55
COL8A1-201ENST00000261037 AMIGO3Q86WK7 504 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 APCDD1Q8J025 514 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 SYNPOQ8N3V7 929 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 RBP7Q96R05 134 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 CCDC106Q9BWC9 280 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 ACSL6Q9UKU0 697 aa11.62□□□□□ -0.55
COL8A1-201ENST00000261037 SNAP29O95721 258 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 FAM163BP0C2L3 166 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 C1GALT1C1LP0DN25 315 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 EIF2S3LQ2VIR3 472 aaKnown RBP11.61□□□□□ -0.55
COL8A1-201ENST00000261037 RAB6CQ53S08 254 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 LIPJQ5W064 366 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF761Q86XN6 746 aaPredicted RBP11.61□□□□□ -0.55
COL8A1-201ENST00000261037 SLC44A3Q8N4M1 653 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 OR51A7Q8NH64 312 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 RAB6CQ9H0N0 254 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ATG5Q9H1Y0 275 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 C1orf21Q9H246 121 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ASB6Q9NWX5 421 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 PADI2Q9Y2J8 665 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 CD8B2A6NJW9 211 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 HTRA2O43464 458 aaPredicted RBP11.61□□□□□ -0.55
COL8A1-201ENST00000261037 CSTAP01040 98 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 H2BFMP0C1H6 154 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 CD8BP10966 210 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 MAGEA8P43361 318 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 KCNC4Q03721 635 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 C6orf136Q5SQH8 315 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 FAM69BQ5VUD6 431 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 AVL9Q8NBF6 648 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 MINDY2Q8NBR6 621 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ZDHHC12Q96GR4 267 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 C1orf74Q96LT6 269 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 SLC6A7Q99884 636 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ARHGAP39Q9C0H5 1083 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 PPP4R1LQ9P1A2 415 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 MARCH4Q9P2E8 410 aaPredicted RBP11.61□□□□□ -0.55
COL8A1-201ENST00000261037 OR1A2Q9Y585 309 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ST14Q9Y5Y6 855 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 A0A1W2PQU0 124 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 MYADML2A6NDP7 307 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 CCRL2O00421 344 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ABCB7O75027 752 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 GPR32O75388 356 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 RFPL1O75677 317 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 IFNA7P01567 189 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 PTGS2P35354 604 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ZXDBP98169 803 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 XKRXQ6PP77 449 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 SIAH1Q8IUQ4 282 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ZC3H10Q96K80 434 aaKnown RBP11.61□□□□□ -0.55
COL8A1-201ENST00000261037 POPDC3Q9HBV1 291 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ACSL5Q9ULC5 683 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 LRRC42Q9Y546 428 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 LRP6O75581 1613 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 HEPACAM2A8MVW5 462 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 SDC3O75056 442 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 MAPK3P27361 379 aaPredicted RBP11.61□□□□□ -0.55
COL8A1-201ENST00000261037 IST1P53990 364 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 RPL26P61254 145 aaKnown RBP11.61□□□□□ -0.55
COL8A1-201ENST00000261037 MVKQ03426 396 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 RPA4Q13156 261 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 CRTC1Q6UUV9 634 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 XKR5Q6UX68 686 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 OR5J2Q8NH18 312 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF382Q96SR6 550 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 FAM83CQ9BQN1 747 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 TAS2R10Q9NYW0 307 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 STOX2Q9P2F5 926 aaPredicted RBP11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ACTL7AQ9Y615 435 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 RTCAO00442 366 aaKnown RBP11.61□□□□□ -0.55
COL8A1-201ENST00000261037 RFPL2O75678 378 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 S100A2P29034 98 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ARL3P36405 182 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 EIF5AP63241 154 aaKnown RBP11.61□□□□□ -0.55
COL8A1-201ENST00000261037 E2F1Q01094 437 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 TECRLQ5HYJ1 363 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 IER5LQ5T953 404 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 ZNF773Q6PK81 442 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 OR13C3Q8NGS6 347 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 WDR92Q96MX6 357 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 KCNK12Q9HB15 430 aa11.61□□□□□ -0.55
COL8A1-201ENST00000261037 GNRHRP30968 328 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 ATP4BP51164 291 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 UNC50Q53HI1 259 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 FIGNL1Q6PIW4 674 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 SAMD12Q8N8I0 201 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 THAP4Q8WY91 577 aa11.6□□□□□ -0.55
COL8A1-201ENST00000261037 IMP4Q96G21 291 aaKnown RBP11.6□□□□□ -0.55
COL8A1-201ENST00000261037 YTHDF1Q9BYJ9 559 aaKnown RBP11.6□□□□□ -0.55
COL8A1-201ENST00000261037 SRA1Q9HD15 236 aaKnown RBP11.6□□□□□ -0.55
COL8A1-201ENST00000261037 IRS2Q9Y4H2 1338 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms