RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 HORMAD2Q8N7B1 307 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 C7orf57Q8NEG2 295 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 GRAMD1AQ96CP6 724 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 ACTR5Q9H9F9 607 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 VSX1Q9NZR4 365 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 DUX4Q9UBX2 424 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 APPL1Q9UKG1 709 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 SPTBN1Q01082 2364 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 GLOD5A6NK44 160 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 FAM47E-STBD1D6RA91 191 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 BCAS2O75934 225 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 SNUPNO95149 360 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 DLGAP3O95886 979 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 HSD3B1P14060 373 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 NDUFAF6Q330K2 333 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 RPS26P11Q5JNZ5 115 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 FAM198BQ6UWH4 519 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 FRRS1Q6ZNA5 592 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 SPRED1Q7Z699 444 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 LRRC75AQ8NAA5 344 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC16A11Q8NCK7 471 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 OR52E4Q8NGH9 312 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 LRRC8CQ8TDW0 803 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 TBC1D20Q96BZ9 403 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 PTDSS2Q9BVG9 487 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 IL17BQ9UHF5 180 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 KPNA3O00505 521 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 DYRK3O43781 588 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ATP5BP06576 529 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 LINGO3P0C6S8 592 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 MPC1LP0DKB6 136 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 COX4I1P13073 169 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 DLX5P56178 289 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 OR1D5P58170 312 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 MAT1AQ00266 395 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 FAM199XQ6PEV8 388 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 LYPD4Q6UWN0 246 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 SEM1Q6ZVN7 128 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 DNAAF3Q8N9W5 541 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 WFIKKN2Q8TEU8 576 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 UBE2E3Q969T4 207 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 RMDN1Q96DB5 314 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF75AQ96N20 296 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF347Q96SE7 839 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 CCM2Q9BSQ5 444 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 GPR174Q9BXC1 333 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 NAA50Q9GZZ1 169 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 HHATLQ9HCP6 504 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 GIMAP4Q9NUV9 329 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF224Q9NZL3 707 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ATP6V1HQ9UI12 483 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ANGPTL2Q9UKU9 493 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF510Q9Y2H8 683 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ICE1Q9Y2F5 2266 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 TLN2Q9Y4G6 2542 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 URB1O60287 2271 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 TRBV23OR9-2A0A075B6M9 112 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 FOXE1O00358 373 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ACP2P11117 423 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 CPMP14384 443 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 SRP54P61011 504 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 EEF1A1P68104 462 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 RIPK1Q13546 671 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 IRF3Q14653 427 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 TOMM34Q15785 309 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC23A3Q6PIS1 610 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 LINC00523Q86TU6 105 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 CLDN22Q8N7P3 220 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC13A3Q8WWT9 602 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 PYDC1Q8WXC3 89 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 PBXIP1Q96AQ6 731 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 LRRC58Q96CX6 371 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 AMDHD1Q96NU7 426 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 UBL7Q96S82 380 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 SDHCQ99643 169 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 APOBEC2Q9Y235 224 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 SIRT4Q9Y6E7 314 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 A0A1W2PP18 115 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 F3P13726 295 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 NQO1P15559 274 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 DAPP51397 102 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 EMP3P54852 163 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 SNRPD1P62314 119 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 C1QL3Q5VWW1 255 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 SAXO2Q658L1 398 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 OR4F3Q6IEY1 312 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF544Q6NX49 715 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 DSG4Q86SJ6 1040 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC22A9Q8IVM8 553 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 OR56A4Q8NGH8 313 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 OR9Q1Q8NGQ5 310 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 FAM174AQ8TBP5 190 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 MIPOL1Q8TD10 442 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 CHRNA10Q9GZZ6 450 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 PPP1R3EQ9H7J1 279 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 BFARQ9NZS9 450 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 ZFP69BQ9UJL9 534 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 K7EPI3 171 aa5.25□□□□□ -1.57
TOPBP1-201ENST00000260810 GSTA4O15217 222 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms