RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 DAPP1Q9UN19 280 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 SPACA6W5XKT8 324 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 ACACAQ13085 2346 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 APC2O95996 2303 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 IGLV3-12A0A075B6K2 115 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 TERTO14746 1132 aaKnown RBP19.51■□□□□ 0.71
RTCA-201ENST00000260563 KLK10O43240 276 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 CBX6O95503 412 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 RNH1P13489 461 aaKnown RBP19.51■□□□□ 0.71
RTCA-201ENST00000260563 PRDX6P30041 224 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 MAPK12P53778 367 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 LIM2P55344 173 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 RAB38P57729 211 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 SLAMF1Q13291 335 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 RUNX2Q13950 521 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 NKG7Q16617 165 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 RIPOR1Q6ZS17 1223 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 CCDC121Q6ZUS5 278 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 VASH2Q86V25 355 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 RP9Q8TA86 221 aaKnown RBP19.51■□□□□ 0.71
RTCA-201ENST00000260563 STT3BQ8TCJ2 826 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 C16orf78Q8WTQ4 265 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 OR1F2PQ96R84 312 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 ZBTB18Q99592 522 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 TUBB6Q9BUF5 446 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 RBCK1Q9BYM8 510 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 LYRM4Q9HD34 91 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 LYARQ9NX58 379 aaKnown RBP19.51■□□□□ 0.71
RTCA-201ENST00000260563 TAGLN3Q9UI15 199 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 ERICH4A6NGS2 130 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 RRP8O43159 456 aaKnown RBP19.5■□□□□ 0.71
RTCA-201ENST00000260563 TMPRSS11DO60235 418 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 DNAJB6O75190 326 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 LRATO95237 230 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 ZGLP1P0C6A0 271 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 COX4I1P13073 169 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 LIFP15018 202 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 PRPS1L1P21108 318 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 IL10P22301 178 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 IL12AP29459 219 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 EIF2S3P41091 472 aaKnown RBP19.5■□□□□ 0.71
RTCA-201ENST00000260563 GSTM5P46439 218 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 POLR2JP52435 117 aaKnown RBP19.5■□□□□ 0.71
RTCA-201ENST00000260563 TRA2BP62995 288 aaKnown RBP19.5■□□□□ 0.71
RTCA-201ENST00000260563 VWA2Q5GFL6 755 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 SNX32Q86XE0 403 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 ZC3H7AQ8IWR0 971 aaKnown RBP19.5■□□□□ 0.71
RTCA-201ENST00000260563 TMEM132CQ8N3T6 1108 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 KRTCAP2Q8N6L1 136 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 EFCAB3Q8N7B9 438 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 GLB1L3Q8NCI6 653 aaPredicted RBP19.5■□□□□ 0.71
RTCA-201ENST00000260563 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.5■□□□□ 0.71
RTCA-201ENST00000260563 NSL1Q96IY1 281 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 DCBLD2Q96PD2 775 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 SPSB2Q99619 263 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 TGIF2Q9GZN2 237 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 SOX17Q9H6I2 414 aaPredicted RBP19.5■□□□□ 0.71
RTCA-201ENST00000260563 MYNNQ9NPC7 610 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 PHF11Q9UIL8 331 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 FBXW2Q9UKT8 454 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 FARSAQ9Y285 508 aaKnown RBP19.5■□□□□ 0.71
RTCA-201ENST00000260563 PCDHGA6Q9Y5G7 932 aa19.5■□□□□ 0.71
RTCA-201ENST00000260563 LOC100653049A0A140TA62 436 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 FAM234BA2RU67 622 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 C9JVG2 144 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 PRMT3O60678 531 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 CNOT3O75175 753 aaKnown RBP19.49■□□□□ 0.71
RTCA-201ENST00000260563 KRT34O76011 436 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 FHP07954 510 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 F8A1P23610 371 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 PTPN4P29074 926 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 FOLR3P41439 243 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 ZFP36L2P47974 494 aaKnown RBP19.49■□□□□ 0.71
RTCA-201ENST00000260563 CLNS1AP54105 237 aaKnown RBP19.49■□□□□ 0.71
RTCA-201ENST00000260563 KCNK10P57789 538 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 C21orf58P58505 322 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 TAS2R50P59544 299 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 BNIP1Q12981 228 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 CYLC2Q14093 348 aaPredicted RBP19.49■□□□□ 0.71
RTCA-201ENST00000260563 MFSD4BQ5TF39 518 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 BLOC1S3Q6QNY0 202 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 IKBIPQ70UQ0 350 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 PROSER1Q86XN7 944 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 RIMKLAQ8IXN7 391 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 POU5F2Q8N7G0 328 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 GFM2Q969S9 779 aaKnown RBP19.49■□□□□ 0.71
RTCA-201ENST00000260563 TBC1D20Q96BZ9 403 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 TM4SF18Q96CE8 201 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 MAPKAP1Q9BPZ7 522 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 CLMPQ9H6B4 373 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 TCFL5Q9UL49 500 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 MAPRE3Q9UPY8 281 aa19.49■□□□□ 0.71
RTCA-201ENST00000260563 WBP11Q9Y2W2 641 aaKnown RBP19.49■□□□□ 0.71
RTCA-201ENST00000260563 PTRH2Q9Y3E5 179 aaKnown RBP19.49■□□□□ 0.71
RTCA-201ENST00000260563 IGF2RP11717 2491 aa19.48■□□□□ 0.71
RTCA-201ENST00000260563 VSTM2BA6NLU5 285 aa19.48■□□□□ 0.71
RTCA-201ENST00000260563 NR5A2O00482 541 aa19.48■□□□□ 0.71
RTCA-201ENST00000260563 BMP10O95393 424 aa19.48■□□□□ 0.71
RTCA-201ENST00000260563 SNRPB2P08579 225 aaKnown RBP19.48■□□□□ 0.71
RTCA-201ENST00000260563 FAM58BPP0C7Q3 252 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms