RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 UBXN11Q5T124 520 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 GPRIN1Q7Z2K8 1008 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 NPWQ8N729 165 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 OR6Q1Q8NGQ2 317 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 FEVQ99581 238 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 SLC30A3Q99726 388 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 CENPOQ9BU64 300 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 C20orf27Q9GZN8 174 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 AIG1Q9NVV5 245 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 DPP7Q9UHL4 492 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 CICQ96RK0 1608 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 ATP6V1G2-DDX39BF2Z307 99 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 RBBP9O75884 186 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 ADH1AP07327 375 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 GXYLT1Q4G148 440 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 ALKBH2Q6NS38 261 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 BORAQ6PGQ7 559 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 CHPT1Q8WUD6 406 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 OR51B5Q9H339 312 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 TXNRD2Q9NNW7 524 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 FAM120CQ9NX05 1096 aaKnown RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 TIMM8BQ9Y5J9 83 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 PRSS51A0A1B0GVH4 220 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF487B1APH4 448 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 B8ZZF3 427 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF254O75437 659 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 C8orf89P0DMQ9 161 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 GGT1P19440 569 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 RPS13P62277 151 aaKnown RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 MC2RQ01718 297 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 DYRK1AQ13627 763 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 GK2Q14410 553 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 FLYWCH1Q4VC44 716 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 CNIH2Q6PI25 160 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 MBOAT1Q6ZNC8 495 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 THOC6Q86W42 341 aaKnown RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 RGL4Q8IZJ4 473 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 METTL4Q8N3J2 472 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 TCTEX1D2Q8WW35 142 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 NEUROD4Q9HD90 331 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 TMEM5Q9Y2B1 443 aa9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF142P52746 1687 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL2-201ENST00000260327 TBC1D3DA0A087WVF3 549 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 TBC1D3IA0A087WXS9 549 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 TBC1D3EA0A087X179 549 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 TBC1D3KA0A087X1G2 549 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 TBC1D3FA6NER0 549 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 TBC1D3LB9A6J9 549 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 WASH3PC4AMC7 463 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 S1PR4O95977 384 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 TBC1D3HP0C7X1 549 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 CAPN3P20807 821 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 PRMT2P55345 433 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 ABRAXAS2Q15018 415 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 FAM46CQ5VWP2 391 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 ATG9BQ674R7 924 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 TBC1D3GQ6DHY5 549 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 TBC1D3CQ6IPX1 549 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 TBC1D3Q8IZP1 549 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 ARFGAP1Q8N6T3 406 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 OR52B6Q8NGF0 335 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 CCM2Q9BSQ5 444 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 SYT4Q9H2B2 425 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 ARMC1Q9NVT9 282 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 TEX10Q9NXF1 929 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 C7orf72A4D263 438 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 EBLN1P0CF75 366 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 PPM1AP35813 382 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 ARSDP51689 593 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 CRISP1P54107 249 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 EMX1Q04741 257 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 SPIN4Q56A73 249 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 ALG1LQ6GMV1 187 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 LRR1Q96L50 414 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF599Q96NL3 588 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 GAL3ST4Q96RP7 486 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 RANBP9Q96S59 729 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 DOHHQ9BU89 302 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF226Q9NYT6 803 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 CFAP20Q9Y6A4 193 aaKnown RBP9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 A0A1B0GVC2 190 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 A0A1W2PQ09 198 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 A6NIN4 97 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 AGPAT2O15120 278 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 OIP5O43482 229 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 HK3P52790 923 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 ST3GAL3Q11203 375 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF630Q2M218 657 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 SPIN3Q5JUX0 258 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 PLPP4Q5VZY2 271 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 GDPD1Q8N9F7 314 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 OR7G2Q8NG99 324 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 RIOK2Q9BVS4 552 aaKnown RBP9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 ACTR6Q9GZN1 396 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 KCNH6Q9H252 994 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 C5P01031 1676 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF670-ZNF695F2Z2N8 137 aa9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 EIF1AYO14602 144 aaKnown RBP9.36□□□□□ -0.91
CTDSPL2-201ENST00000260327 PRSS56P0CW18 603 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms