RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 SLC5A11Q8WWX8 675 aa12.88□□□□□ -0.35
VHL-201ENST00000256474 STARD8Q92502 1023 aa12.88□□□□□ -0.35
VHL-201ENST00000256474 COL26A1Q96A83 441 aa12.88□□□□□ -0.35
VHL-201ENST00000256474 ZSCAN5AQ9BUG6 496 aa12.88□□□□□ -0.35
VHL-201ENST00000256474 TP63Q9H3D4 680 aaPredicted RBP12.88□□□□□ -0.35
VHL-201ENST00000256474 DMRT3Q9NQL9 472 aa12.88□□□□□ -0.35
VHL-201ENST00000256474 TDP1Q9NUW8 608 aa12.88□□□□□ -0.35
VHL-201ENST00000256474 ANHXE9PGG2 379 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 GPX5O75715 221 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 HOXB9P17482 250 aaPredicted RBP12.87□□□□□ -0.35
VHL-201ENST00000256474 XKP51811 444 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 SYPL1Q16563 259 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 PARS2Q7L3T8 475 aaKnown RBP12.87□□□□□ -0.35
VHL-201ENST00000256474 FCGR1BQ92637 280 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 NECTIN4Q96NY8 510 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 RETREG1Q9H6L5 497 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 KLHL3Q9UH77 587 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 WDR37Q9Y2I8 494 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 WBP11Q9Y2W2 641 aaKnown RBP12.87□□□□□ -0.35
VHL-201ENST00000256474 SPIN1Q9Y657 262 aaPredicted RBP12.87□□□□□ -0.35
VHL-201ENST00000256474 CCRL2O00421 344 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 OR1F1O43749 312 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 IDH3BO43837 385 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 PRMT3O60678 531 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 C1orf105O95561 183 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 FURINP09958 794 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 TNFSF8P32971 234 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 DOC2BQ14184 412 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 ZNF750Q32MQ0 723 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 NXNL2Q5VZ03 156 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 LIPIQ6XZB0 460 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 ECHDC3Q96DC8 303 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 MCCC1Q96RQ3 725 aaPredicted RBP12.87□□□□□ -0.35
VHL-201ENST00000256474 NEK6Q9HC98 313 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 SPHK2Q9NRA0 654 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 COMMD3Q9UBI1 195 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 BTNL2Q9UIR0 455 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 HIDE1A8MVS5 230 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 H0YIV9 168 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 TAF4O00268 1085 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 SLCO2B1O94956 709 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 PCCBP05166 539 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 RPS19P39019 145 aaKnown RBP12.87□□□□□ -0.35
VHL-201ENST00000256474 RFX3P48380 749 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 LIM2P55344 173 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 TUBA1BP68363 451 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 ZNF362Q5T0B9 420 aaPredicted RBP12.87□□□□□ -0.35
VHL-201ENST00000256474 OR2G6Q5TZ20 316 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 TMPRSS11AQ6ZMR5 421 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 TUBA1AQ71U36 451 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 MMAAQ8IVH4 418 aaKnown RBP12.87□□□□□ -0.35
VHL-201ENST00000256474 OXR1Q8N573 874 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 PXYLP1Q8TE99 480 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 REPS1Q96D71 796 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 CAPNS2Q96L46 248 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 SLC30A2Q9BRI3 323 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 ENPP4Q9Y6X5 453 aa12.87□□□□□ -0.35
VHL-201ENST00000256474 AGAP14A8MT82 685 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 KRT75O95678 551 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 TAP2Q03519 686 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 SEC23BQ15437 767 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 SNAPC1Q16533 368 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 GPAT3Q53EU6 434 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 RRM2BQ7LG56 351 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 GRASPQ7Z6J2 395 aaPredicted RBP12.86□□□□□ -0.35
VHL-201ENST00000256474 ADIPOR2Q86V24 386 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 SFTPA1Q8IWL2 248 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 ZSWIM3Q96MP5 696 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 DYRK4Q9NR20 520 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 TBC1D14Q9P2M4 693 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 STOML2Q9UJZ1 356 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 ZNF232Q9UNY5 417 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 PEX16Q9Y5Y5 336 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 TRBV23OR9-2A0A075B6M9 112 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 GPR37L1O60883 481 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 PSIP1O75475 530 aaKnown RBP12.86□□□□□ -0.35
VHL-201ENST00000256474 PCDH8O95206 1070 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 SYN1P17600 705 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 PSMA1P25786 263 aaKnown RBP12.86□□□□□ -0.35
VHL-201ENST00000256474 GSTM5P46439 218 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 PRAMEF14Q5SWL7 426 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 PRAMEF13Q5VWM6 474 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 CHCHD4Q8N4Q1 142 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 SCAIQ8N9R8 606 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 VN1R2Q8NFZ6 395 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 SLC38A5Q8WUX1 472 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 KAT2AQ92830 837 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 DIRAS2Q96HU8 199 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 LYSMD1Q96S90 227 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 C17orf62Q9BQA9 187 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 TSSK6Q9BXA6 273 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 GULP1Q9UBP9 304 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 PADI2Q9Y2J8 665 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 RNASET2O00584 256 aaKnown RBP12.86□□□□□ -0.35
VHL-201ENST00000256474 KMOO15229 486 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 TSPAN19P0C672 248 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 VIPR2P41587 438 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 CD83Q01151 205 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 PYDC2Q56P42 97 aa12.86□□□□□ -0.35
VHL-201ENST00000256474 ATAT1Q5SQI0 421 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms