RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 LRIF1Q5T3J3 769 aa14.33□□□□□ -0.11
SAFB2-201ENST00000252542 LEMD2Q8NC56 503 aa14.33□□□□□ -0.11
SAFB2-201ENST00000252542 PAPD5Q8NDF8 572 aaKnown RBP14.33□□□□□ -0.11
SAFB2-201ENST00000252542 CHTF18Q8WVB6 975 aa14.33□□□□□ -0.11
SAFB2-201ENST00000252542 LCN9Q8WX39 176 aa14.33□□□□□ -0.11
SAFB2-201ENST00000252542 PATE1Q8WXA2 126 aa14.33□□□□□ -0.11
SAFB2-201ENST00000252542 LRIG1Q96JA1 1093 aa14.33□□□□□ -0.11
SAFB2-201ENST00000252542 YTHDF1Q9BYJ9 559 aaKnown RBP14.33□□□□□ -0.11
SAFB2-201ENST00000252542 EHD1Q9H4M9 534 aa14.33□□□□□ -0.11
SAFB2-201ENST00000252542 GPR83Q9NYM4 423 aa14.33□□□□□ -0.11
SAFB2-201ENST00000252542 SLC6A14Q9UN76 642 aa14.33□□□□□ -0.11
SAFB2-201ENST00000252542 TPRKBQ9Y3C4 175 aa14.33□□□□□ -0.11
SAFB2-201ENST00000252542 TCF20Q9UGU0 1960 aaKnown RBP14.33□□□□□ -0.12
SAFB2-201ENST00000252542 PDPK1O15530 556 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 CPNE6O95741 557 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 HOXB2P14652 356 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 PTX3P26022 381 aaPredicted RBP14.33□□□□□ -0.12
SAFB2-201ENST00000252542 GSTM2P28161 218 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 OPRD1P41143 372 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 IFITM3Q01628 133 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 GRSF1Q12849 480 aaKnown RBP eCLIP14.33□□□□□ -0.12
SAFB2-201ENST00000252542 NPRL3Q12980 569 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 GGTA1PQ4G0N0 100 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 EIF3MQ7L2H7 374 aaKnown RBP14.33□□□□□ -0.12
SAFB2-201ENST00000252542 ANKRD53Q8N9V6 530 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 SLC9A6Q92581 669 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 NACC2Q96BF6 587 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 DOHHQ9BU89 302 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 TM9SF3Q9HD45 589 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 DDX28Q9NUL7 540 aaKnown RBP14.33□□□□□ -0.12
SAFB2-201ENST00000252542 PAK1IP1Q9NWT1 392 aaPredicted RBP14.33□□□□□ -0.12
SAFB2-201ENST00000252542 TMCC3Q9ULS5 477 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 M0R3H8 397 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 SCN2BO60939 215 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 PXNP49023 591 aaPredicted RBP14.33□□□□□ -0.12
SAFB2-201ENST00000252542 MVKQ03426 396 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 EMX1Q04741 257 aaPredicted RBP14.33□□□□□ -0.12
SAFB2-201ENST00000252542 PIN1Q13526 163 aaPredicted RBP14.33□□□□□ -0.12
SAFB2-201ENST00000252542 OXA1LQ15070 435 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 SF3B4Q15427 424 aaKnown RBP eCLIP14.33□□□□□ -0.121e-6■■■■□ 20.9
SAFB2-201ENST00000252542 ZNF605Q86T29 641 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 SFTPA2Q8IWL1 248 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 COPS4Q9BT78 406 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 PALMDQ9NP74 551 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 MRPS30Q9NP92 439 aaKnown RBP14.33□□□□□ -0.12
SAFB2-201ENST00000252542 TMEFF2Q9UIK5 374 aaPredicted RBP14.33□□□□□ -0.12
SAFB2-201ENST00000252542 MAFFQ9ULX9 164 aa14.33□□□□□ -0.12
SAFB2-201ENST00000252542 ZNF24P17028 368 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 ALOX12P18054 663 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 CCT3P49368 545 aaKnown RBP14.32□□□□□ -0.12
SAFB2-201ENST00000252542 EPHA5P54756 1037 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 DCDC1P59894 354 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 DLX2Q07687 328 aaPredicted RBP14.32□□□□□ -0.12
SAFB2-201ENST00000252542 SYPL1Q16563 259 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 TJAP1Q5JTD0 557 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 COLEC12Q5KU26 742 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 RBM48Q5RL73 367 aaKnown RBP14.32□□□□□ -0.12
SAFB2-201ENST00000252542 ERICH5Q6P6B1 374 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 B3GNT8Q7Z7M8 397 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 P2RY8Q86VZ1 359 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 HORMAD2Q8N7B1 307 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 SETD9Q8NE22 299 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 GPN2Q9H9Y4 310 aaPredicted RBP14.32□□□□□ -0.12
SAFB2-201ENST00000252542 SEMA3GQ9NS98 782 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 SPHK1Q9NYA1 384 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 DKK3Q9UBP4 350 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 SCN8AQ9UQD0 1980 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 STK25O00506 426 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 RGS10O43665 173 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 KLF8O95600 359 aaPredicted RBP14.32□□□□□ -0.12
SAFB2-201ENST00000252542 FURINP09958 794 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 BMP4P12644 408 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 GPX2P18283 190 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 KCNC3Q14003 757 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 CLEC12AQ5QGZ9 265 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 C1orf53Q5VUE5 145 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 USP51Q70EK9 711 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 RRM2BQ7LG56 351 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 C6orf120Q7Z4R8 191 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 SERPINA11Q86U17 422 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 ETFBKMTQ8IXQ9 262 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 IQCF1Q8N6M8 205 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 OR8J2Q8NGG1 315 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 ZHX1-C8orf76Q96EF9 292 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 TMEM19Q96HH6 336 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 CHCHD6Q9BRQ6 235 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 SPATA7Q9P0W8 599 aa14.32□□□□□ -0.12
SAFB2-201ENST00000252542 EXO1Q9UQ84 846 aaKnown RBP14.32□□□□□ -0.12
SAFB2-201ENST00000252542 TRBV5-3A0A0A0MS03 114 aa14.31□□□□□ -0.12
SAFB2-201ENST00000252542 TMPRSS11DO60235 418 aa14.31□□□□□ -0.12
SAFB2-201ENST00000252542 CYP7B1O75881 506 aa14.31□□□□□ -0.12
SAFB2-201ENST00000252542 CH25HO95992 272 aa14.31□□□□□ -0.12
SAFB2-201ENST00000252542 STSP08842 583 aa14.31□□□□□ -0.12
SAFB2-201ENST00000252542 DRD3P35462 400 aa14.31□□□□□ -0.12
SAFB2-201ENST00000252542 ISL1P61371 349 aa14.31□□□□□ -0.12
SAFB2-201ENST00000252542 BTN3A2P78410 334 aa14.31□□□□□ -0.12
SAFB2-201ENST00000252542 TUBA3CQ13748 450 aa14.31□□□□□ -0.12
SAFB2-201ENST00000252542 MPEG1Q2M385 716 aa14.31□□□□□ -0.12
SAFB2-201ENST00000252542 ADPRMQ3LIE5 342 aa14.31□□□□□ -0.12
SAFB2-201ENST00000252542 CCDC80Q76M96 950 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms