RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CBFA2T3O75081 653 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 CCNB2O95067 398 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 GASTP01350 101 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 FUCA1P04066 466 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 RPN2P04844 631 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 IFNW1P05000 195 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 CXCR2P25025 360 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 HEPACAMQ14CZ8 416 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 PDGFRLQ15198 375 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 MAPK11Q15759 364 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 TBCEQ15813 527 aaPredicted RBP18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 RGS21Q2M5E4 152 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 TANGO2Q6ICL3 276 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 UBE3DQ7Z6J8 389 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 PLD3Q8IV08 490 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 SLC30A8Q8IWU4 369 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 AQP11Q8NBQ7 271 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 ZNF784Q8NCA9 323 aaPredicted RBP18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 GPR32P1Q8NGA4 272 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 SMPDL3AQ92484 453 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 MYDGFQ969H8 173 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 SLC38A4Q969I6 547 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 EXOSC8Q96B26 276 aaKnown RBP18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 PPP1R14BQ96C90 147 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 TMEM19Q96HH6 336 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 PSD2Q9BQI7 771 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 HMG20AQ9NP66 347 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 A4GALTQ9NPC4 353 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 DNAAF2Q9NVR5 837 aaKnown RBP18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 SERGEFQ9UGK8 458 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 GRXCR1A8MXD5 290 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 PPM1DO15297 605 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 LATO43561 262 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 TBX19O60806 448 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 SEMA7AO75326 666 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 HNRNPCP07910 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 GJA4P35212 333 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 HSD17B2P37059 387 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 RAB15P59190 212 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 PTGES3Q15185 160 aaKnown RBP18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 ZNF770Q6IQ21 691 aaPredicted RBP18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 KLHL17Q6TDP4 642 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 PAGE2Q7Z2X7 111 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 DENND6BQ8NEG7 585 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 FCGR1BQ92637 280 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 ALPK1Q96QP1 1244 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 SLIRPQ9GZT3 109 aaKnown RBP18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 KCND3Q9UK17 655 aa18.57■□□□□ 0.56
CDC42EP1-201ENST00000249014 A0A0G2JN53 185 aa18.56■□□□□ 0.56
CDC42EP1-201ENST00000249014 EFCAB9A8MZ26 197 aa18.56■□□□□ 0.56
CDC42EP1-201ENST00000249014 OR1F1O43749 312 aa18.56■□□□□ 0.56
CDC42EP1-201ENST00000249014 STSP08842 583 aa18.56■□□□□ 0.56
CDC42EP1-201ENST00000249014 SLC35G4P0C7Q5 338 aa18.56■□□□□ 0.56
CDC42EP1-201ENST00000249014 FRKP42685 505 aaPredicted RBP18.56■□□□□ 0.56
CDC42EP1-201ENST00000249014 MLF2Q15773 248 aaPredicted RBP18.56■□□□□ 0.56
CDC42EP1-201ENST00000249014 VITQ6UXI7 678 aa18.56■□□□□ 0.56
CDC42EP1-201ENST00000249014 LINC00299Q6ZSB3 139 aa18.56■□□□□ 0.56
CDC42EP1-201ENST00000249014 C6orf120Q7Z4R8 191 aa18.56■□□□□ 0.56
CDC42EP1-201ENST00000249014 ADCK1Q86TW2 530 aa18.56■□□□□ 0.56
CDC42EP1-201ENST00000249014 TEX101Q9BY14 249 aa18.56■□□□□ 0.56
CDC42EP1-201ENST00000249014 NMNAT1Q9HAN9 279 aaPredicted RBP18.56■□□□□ 0.56
CDC42EP1-201ENST00000249014 IGKV1-8A0A0C4DH67 115 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 TRBV4-1A0A0J9YWV2 114 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 C5orf58C9J3I9 102 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 KMOO15229 486 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 NDUFS4O43181 175 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 MFN2O95140 757 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 KAT7O95251 611 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 DGKEP52429 567 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 KCNC4Q03721 635 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 FAM46CQ5VWP2 391 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 NUDT13Q86X67 352 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 SNX29P2Q8IUI4 249 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 DEPDC4Q8N2C3 294 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 MFSD4AQ8N468 514 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 OR6Q1Q8NGQ2 317 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 WDR12Q9GZL7 423 aaKnown RBP18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 AICDAQ9GZX7 198 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 PCBD2Q9H0N5 130 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 SERHL2Q9H4I8 314 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 NEUROD4Q9HD90 331 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 FBXO8Q9NRD0 319 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 OSGIN1Q9UJX0 560 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 WBP11Q9Y2W2 641 aaKnown RBP18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 DNMT3AQ9Y6K1 912 aaPredicted RBP18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 MYO10Q9HD67 2058 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 HMGN4O00479 90 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 BMP4P12644 408 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 ACP5P13686 325 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 CTSKP43235 329 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 CSNK1G2P78368 415 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 GPM6BQ13491 265 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 FGL2Q14314 439 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 TIGD6Q17RP2 521 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 FERD3LQ96RJ6 166 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 INSM2Q96T92 566 aaPredicted RBP18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 XKR8Q9H6D3 395 aa18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 ZBTB20Q9HC78 741 aaPredicted RBP18.55■□□□□ 0.56
CDC42EP1-201ENST00000249014 IMPAD1Q9NX62 359 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms