RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 TMEM52BQ4KMG9 183 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 FNDC3BQ53EP0 1204 aaKnown RBP20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 ARMCX4Q5H9R4 360 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 CEACAM20Q6UY09 585 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 LACC1Q8IV20 430 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 ADGRF3Q8IZF5 1079 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 KBTBD8Q8NFY9 601 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 OR5P2Q8WZ92 322 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 ERLEC1Q96DZ1 483 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 SLAMF7Q9NQ25 335 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 CNOT2Q9NZN8 540 aaKnown RBP20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 CCDC59Q9P031 241 aaKnown RBP20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 WBP11Q9Y2W2 641 aaKnown RBP20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 RBMX2Q9Y388 322 aaKnown RBP20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 PCYT1BQ9Y5K3 369 aaPredicted RBP20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 EDDM13A0A1B0GTR0 161 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 EFCAB10A6NFE3 127 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 TAF4O00268 1085 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 TLL1O43897 1013 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 MPZL2O60487 215 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 GASTP01350 101 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 ERGP11308 486 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 CRISP1P54107 249 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 OLR1P78380 273 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 DNASE1L3Q13609 305 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 KHDRBS2Q5VWX1 349 aaKnown RBP20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 ZNF367Q7RTV3 350 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 DCUN1D3Q8IWE4 304 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 ETFBKMTQ8IXQ9 262 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 C2orf73Q8N5S3 287 aaPredicted RBP20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 NATD1Q8N6N6 113 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 CELF5Q8N6W0 485 aaKnown RBP20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 HORMAD2Q8N7B1 307 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 AMER2Q8N7J2 671 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 CDCA4Q9BXL8 241 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 PELI2Q9HAT8 420 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 PRDM8Q9NQV8 689 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 INSL6Q9Y581 213 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 NOX1Q9Y5S8 564 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 DENND4AQ7Z401 1863 aa20.59■□□□□ 0.89
SH2D3A-201ENST00000245908 DSCR3O14972 297 aa20.59■□□□□ 0.89
SH2D3A-201ENST00000245908 CHMP24386 653 aa20.59■□□□□ 0.89
SH2D3A-201ENST00000245908 RGS6P49758 472 aa20.59■□□□□ 0.89
SH2D3A-201ENST00000245908 INAVAQ3KP66 663 aa20.59■□□□□ 0.89
SH2D3A-201ENST00000245908 POF1BQ8WVV4 589 aa20.59■□□□□ 0.89
SH2D3A-201ENST00000245908 MS4A8Q9BY19 250 aa20.59■□□□□ 0.89
SH2D3A-201ENST00000245908 RHCGQ9UBD6 479 aa20.59■□□□□ 0.89
SH2D3A-201ENST00000245908 AGAP5A6NIR3 686 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 FFAR1O14842 300 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 KIAA0355O15063 1070 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 UPK1BO75841 260 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 DBTP11182 482 aaKnown RBP20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 MAPK12P53778 367 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 LIM2P55344 173 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 RPA4Q13156 261 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 TOR1AIP1Q5JTV8 583 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 COLEC12Q5KU26 742 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 FRMPD2BQ6IN97 320 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 FAM180BQ6P0A1 224 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 C17orf64Q86WR6 236 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 TAGAPQ8N103 731 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 SLC38A5Q8WUX1 472 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 TM4SF18Q96CE8 201 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 ACAT2Q9BWD1 397 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 OR51E2Q9H255 320 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 KLK4Q9Y5K2 254 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 DSPPQ9NZW4 1301 aa20.58■□□□□ 0.89
SH2D3A-201ENST00000245908 ANKDD1BA6NHY2 528 aa20.58■□□□□ 0.88
SH2D3A-201ENST00000245908 C5orf58C9J3I9 102 aa20.58■□□□□ 0.88
SH2D3A-201ENST00000245908 BSGP35613 385 aa20.58■□□□□ 0.88
SH2D3A-201ENST00000245908 ELAVL3Q14576 367 aaKnown RBP20.58■□□□□ 0.88
SH2D3A-201ENST00000245908 RPS26P11Q5JNZ5 115 aaPredicted RBP20.58■□□□□ 0.88
SH2D3A-201ENST00000245908 ERN2Q76MJ5 926 aaKnown RBP20.58■□□□□ 0.88
SH2D3A-201ENST00000245908 CDADC1Q9BWV3 514 aa20.58■□□□□ 0.88
SH2D3A-201ENST00000245908 SIAEQ9HAT2 523 aa20.58■□□□□ 0.88
SH2D3A-201ENST00000245908 POU2F3Q9UKI9 436 aa20.58■□□□□ 0.88
SH2D3A-201ENST00000245908 ISPDA4D126 451 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 PDPK1O15530 556 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 TPD52L2O43399 206 aaKnown RBP20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 BCHEP06276 602 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 CTNNB1P35222 781 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 RPS26P62854 115 aaKnown RBP20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 SF3B4Q15427 424 aaKnown RBP eCLIP20.57■□□□□ 0.889e-6■■■■■ 27.7
SH2D3A-201ENST00000245908 MAPK11Q15759 364 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 TNFAIP8L2Q6P589 184 aaPredicted RBP20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 SLC22A16Q86VW1 577 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 SLC44A2Q8IWA5 706 aaPredicted RBP20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 NLGN4XQ8N0W4 816 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 ANKRD53Q8N9V6 530 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 RSPRY1Q96DX4 576 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 TMEM19Q96HH6 336 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 COX14Q96I36 57 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 NEUROD4Q9HD90 331 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 WASH6PQ9NQA3 447 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 CLN6Q9NWW5 311 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 TAC3Q9UHF0 121 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 PRKAB1Q9Y478 270 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 CCDC88CQ9P219 2028 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 LOC100506127A0A0U1RQW1 187 aa20.57■□□□□ 0.88
SH2D3A-201ENST00000245908 SAGE2PA6NJ88 616 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms