RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ACSBG2Q5FVE4 666 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 ZNF678Q5SXM1 525 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 XKRXQ6PP77 449 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 PEX11GQ96HA9 241 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 NEDD4LQ96PU5 975 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 SLC6A7Q99884 636 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 REV1Q9UBZ9 1251 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 EPHA6Q9UF33 1036 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 SARDHQ9UL12 918 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 FTCDNL1E5RQL4 147 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 NARSO43776 548 aaKnown RBP12.72□□□□□ -0.37
COL1A1-201ENST00000225964 STOMP27105 288 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 SLC15A3Q8IY34 581 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 TIGD4Q8IY51 512 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 OR14L1PQ8NHC6 308 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 KIAA1191Q96A73 305 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 MVB12BQ9H7P6 319 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 ZBTB20Q9HC78 741 aaPredicted RBP12.72□□□□□ -0.37
COL1A1-201ENST00000225964 KCNN3Q9UGI6 736 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 OARD1Q9Y530 152 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 LSM1O15116 133 aaKnown RBP12.72□□□□□ -0.37
COL1A1-201ENST00000225964 IL3P08700 152 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 HNRNPA1P09651 372 aaKnown RBP eCLIP12.72□□□□□ -0.37
COL1A1-201ENST00000225964 PRKACGP22612 351 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 UNQ6126/PRO20091Q6UXV3 157 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 GID4Q8IVV7 300 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 SYNPOQ8N3V7 929 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 SLC37A3Q8NCC5 494 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 LSM14AQ8ND56 463 aaKnown RBP12.72□□□□□ -0.37
COL1A1-201ENST00000225964 OR51G2Q8NGK0 314 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 CD300LFQ8TDQ1 290 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 KCNN1Q92952 543 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 TLCD1Q96CP7 247 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 MGAT4BQ9UQ53 548 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 LCHNA4D1U4 455 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 HLA-DPB1P04440 258 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 CARM1Q86X55 608 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 CENPSQ8N2Z9 138 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 DDIT4LQ96D03 193 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 BCAS3Q9H6U6 928 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 TM9SF3Q9HD45 589 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 TAS2R10Q9NYW0 307 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 PRKCAP17252 672 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 DEFB134Q4QY38 66 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 LRRC25Q8N386 305 aaPredicted RBP12.71□□□□□ -0.37
COL1A1-201ENST00000225964 DIO2Q92813 273 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 SCAMP4Q969E2 229 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 DNTTIP1Q9H147 329 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 EHD1Q9H4M9 534 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 SCP2D1Q9UJQ7 156 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.37
COL1A1-201ENST00000225964 FBP2O00757 339 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 SNAI1O95863 264 aaPredicted RBP12.71□□□□□ -0.37
COL1A1-201ENST00000225964 C1GALT1C1LP0DN25 315 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 NAA10P41227 235 aaPredicted RBP12.71□□□□□ -0.37
COL1A1-201ENST00000225964 HSD11B2P80365 405 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 GALNT10Q86SR1 603 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 KBTBD6Q86V97 674 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 ZNF761Q86XN6 746 aaPredicted RBP12.71□□□□□ -0.37
COL1A1-201ENST00000225964 PLXDC1Q8IUK5 500 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 CMASQ8NFW8 434 aaPredicted RBP12.71□□□□□ -0.37
COL1A1-201ENST00000225964 SORCS1Q8WY21 1168 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 OR1A2Q9Y585 309 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.71□□□□□ -0.37
COL1A1-201ENST00000225964 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.71□□□□□ -0.37
COL1A1-201ENST00000225964 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.71□□□□□ -0.37
COL1A1-201ENST00000225964 PEPDP12955 493 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 GSK3BP49841 420 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 EMX2Q04743 252 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 AIMP2Q13155 320 aaKnown RBP12.71□□□□□ -0.37
COL1A1-201ENST00000225964 FBXO43Q4G163 708 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 BIRC7Q96CA5 298 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 PEAK1Q9H792 1746 aa12.71□□□□□ -0.37
COL1A1-201ENST00000225964 PRSS51A0A1B0GVH4 220 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 SSX5O60225 188 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 F2P00734 622 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 IFNA2P01563 188 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 PGCP20142 388 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 BDH1Q02338 343 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 ANKDD1AQ495B1 522 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF783Q6ZMS7 281 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 OR5L2Q8NGL0 311 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 OR56A3Q8NH54 315 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 OR5P2Q8WZ92 322 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 PITX2Q99697 317 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 MAP3K3Q99759 626 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 BEX2Q9BXY8 128 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 BEX1Q9HBH7 125 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF12P17014 697 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 FOXN2P32314 431 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 GPR143P51810 404 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 CST6Q15828 149 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 DCAF12L1Q5VU92 463 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 ARHGAP12Q8IWW6 846 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 ZDHHC14Q8IZN3 488 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 WDR20Q8TBZ3 569 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 GPR22Q99680 433 aa12.71□□□□□ -0.38
COL1A1-201ENST00000225964 A0A1W2PPK0 400 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 VSTM2BA6NLU5 285 aa12.7□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF850A8MQ14 1090 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms