RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 ZNF461Q8TAF7 563 aa11.82□□□□□ -0.52
NUP88-201ENST00000225696 ASZ1Q8WWH4 475 aa11.82□□□□□ -0.52
NUP88-201ENST00000225696 BHLHE41Q9C0J9 482 aaPredicted RBP11.82□□□□□ -0.52
NUP88-201ENST00000225696 LINC00597Q9H2U6 94 aa11.82□□□□□ -0.52
NUP88-201ENST00000225696 GPBP1L1Q9HC44 474 aaPredicted RBP11.82□□□□□ -0.52
NUP88-201ENST00000225696 NDUFB11Q9NX14 153 aa11.82□□□□□ -0.52
NUP88-201ENST00000225696 CMAHPQ9Y471 501 aa11.82□□□□□ -0.52
NUP88-201ENST00000225696 HYKKA2RU49 373 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 SLC35F4A4IF30 521 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 A8MVJ9 347 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 CENPBD1B2RD01 187 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 H3BN98 237 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 AP2A2O94973 939 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 KLK1P06870 262 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 CHRNB1P11230 501 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 PIPP12273 146 aaPredicted RBP11.81□□□□□ -0.52
NUP88-201ENST00000225696 RHCEP18577 417 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 ENDOUP21128 410 aaKnown RBP11.81□□□□□ -0.52
NUP88-201ENST00000225696 ITGB7P26010 798 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 PTX3P26022 381 aaPredicted RBP11.81□□□□□ -0.52
NUP88-201ENST00000225696 SREBF2Q12772 1141 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 GPAT3Q53EU6 434 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 SPIN4Q56A73 249 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 YIF1BQ5BJH7 314 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 TCTN3Q6NUS6 607 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 TNFAIP8L2Q6P589 184 aaPredicted RBP11.81□□□□□ -0.52
NUP88-201ENST00000225696 NOXA1Q86UR1 476 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 COMTD1Q86VU5 262 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 MEX3DQ86XN8 651 aaKnown RBP11.81□□□□□ -0.52
NUP88-201ENST00000225696 NANOGP1Q8N7R0 232 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 OR7G1Q8NGA0 311 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 OR9Q1Q8NGQ5 310 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 CREB3L4Q8TEY5 395 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 UBASH3BQ8TF42 649 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 AUTS2Q8WXX7 1259 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 KLHL6Q8WZ60 621 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 TMEM80Q96HE8 168 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 NRTNQ99748 197 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 TSSK6Q9BXA6 273 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 SMG9Q9H0W8 520 aaKnown RBP11.81□□□□□ -0.52
NUP88-201ENST00000225696 ABCG4Q9H172 646 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 TXNL4BQ9NX01 149 aaKnown RBP11.81□□□□□ -0.52
NUP88-201ENST00000225696 KCND3Q9UK17 655 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 STUB1Q9UNE7 303 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 CDH23Q9H251 3354 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 A0A0X1KG70 313 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 TMEM88BA6NKF7 163 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 GPR37L1O60883 481 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 ABLIM3O94929 683 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 ALX3O95076 343 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 TP53P04637 393 aaPredicted RBP11.81□□□□□ -0.52
NUP88-201ENST00000225696 IFNW1P05000 195 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 ARAFP10398 606 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 PBLDP30039 288 aaPredicted RBP11.81□□□□□ -0.52
NUP88-201ENST00000225696 HLA-FP30511 346 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 SDC2P34741 201 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 GPC1P35052 558 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 ETV5P41161 510 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 ETV1P50549 477 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 PTPN5P54829 565 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 GPLD1P80108 840 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 TLE2Q04725 743 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 LRRC74AQ0VAA2 488 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 ELAVL2Q12926 359 aaKnown RBP11.81□□□□□ -0.52
NUP88-201ENST00000225696 SAXO2Q658L1 398 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 ASTLQ6HA08 431 aaPredicted RBP11.81□□□□□ -0.52
NUP88-201ENST00000225696 Q6ZVU0 165 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 OLIG3Q7RTU3 272 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 HMGN2P46Q86SG4 172 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 CAMKK1Q8N5S9 505 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 NLGN4YQ8NFZ3 816 aaPredicted RBP11.81□□□□□ -0.52
NUP88-201ENST00000225696 C16orf78Q8WTQ4 265 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 RAB8BQ92930 207 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 SLC25A46Q96AG3 418 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 PPCDCQ96CD2 204 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 DIRAS2Q96HU8 199 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 WDFY2Q96P53 400 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 SLC6A16Q9GZN6 736 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 CXorf36Q9H7Y0 433 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 SLAMF7Q9NQ25 335 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 PPIL1Q9Y3C6 166 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 UNC80Q8N2C7 3258 aa11.81□□□□□ -0.52
NUP88-201ENST00000225696 FABP12A6NFH5 140 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 TNFRSF10AO00220 468 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 PRKYO43930 277 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 OR10H3O60404 316 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 CTSAP10619 480 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 OSMP13725 252 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 PCSK2P16519 638 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 GJA1P17302 382 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 TNNI3P19429 210 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 MYL9P24844 172 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 ELAVL4P26378 380 aaKnown RBP11.8□□□□□ -0.52
NUP88-201ENST00000225696 MAPK8P45983 427 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 SNRPGP62308 76 aaKnown RBP11.8□□□□□ -0.52
NUP88-201ENST00000225696 SCN1BQ07699 218 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 RBBP4Q09028 425 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 PDE7AQ13946 482 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 E2F2Q14209 437 aa11.8□□□□□ -0.52
NUP88-201ENST00000225696 POM121L1PQ3SYA9 428 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms