RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 DNM1P34Q6PK57 102 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 KIAA0907Q7Z7F0 614 aaPredicted RBP13.16□□□□□ -0.3
SIX4-201ENST00000216513 NAA11Q9BSU3 229 aaPredicted RBP13.16□□□□□ -0.3
SIX4-201ENST00000216513 BTBD3Q9Y2F9 522 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 OARD1Q9Y530 152 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 AP1M2Q9Y6Q5 423 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 FIGNL1Q6PIW4 674 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 CXXC5Q7LFL8 322 aaKnown RBP13.16□□□□□ -0.3
SIX4-201ENST00000216513 CAND1Q86VP6 1230 aaKnown RBP13.16□□□□□ -0.3
SIX4-201ENST00000216513 FRMD1Q8N878 549 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 CHST4Q8NCG5 386 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 OR10H4Q8NGA5 316 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.16□□□□□ -0.3
SIX4-201ENST00000216513 LINC01599Q8WXQ3 324 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 OSBPL7Q9BZF2 842 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 TIMMDC1Q9NPL8 285 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 ARGFXA6NJG6 315 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 RLN1P04808 185 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 SFTPDP35247 375 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 HK3P52790 923 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 RASGEF1BQ0VAM2 473 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 C18orf21Q32NC0 220 aaPredicted RBP13.16□□□□□ -0.3
SIX4-201ENST00000216513 OR2L5Q8NG80 312 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 EHD1Q9H4M9 534 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 IL26Q9NPH9 171 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 TVP23BQ9NYZ1 205 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 PSAT1Q9Y617 370 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 C2orf92A0A1B0GVN3 265 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 GJB3O75712 270 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 LCN1P1Q5VSP4 162 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 DMRTB1Q96MA1 342 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 CCDC28BQ9BUN5 200 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 MMADHCQ9H3L0 296 aaPredicted RBP13.16□□□□□ -0.3
SIX4-201ENST00000216513 MYH4Q9Y623 1939 aa13.16□□□□□ -0.3
SIX4-201ENST00000216513 DRGXA6NNA5 263 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 CLIC3O95833 236 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 SYT16Q17RD7 645 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 IER5LQ5T953 404 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 ZNF765Q7L2R6 523 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 PDZD3Q86UT5 571 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 H0Y8X5 98 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 NUDT6P53370 316 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 OR52E8Q6IFG1 317 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 CSNK1G1Q9HCP0 422 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 CUTCQ9NTM9 273 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 ASB6Q9NWX5 421 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 WNT16Q9UBV4 365 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 RSL24D1Q9UHA3 163 aaKnown RBP13.15□□□□□ -0.3
SIX4-201ENST00000216513 NFS1Q9Y697 457 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 DPPA5A6NC42 116 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 CLIC1O00299 241 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 ARSDP51689 593 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 KIR2DS3Q14952 304 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 LIPJQ5W064 366 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 PGBD2Q6P3X8 592 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 B3GNT9Q6UX72 402 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 RNF130Q86XS8 419 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 FBXL6Q8N531 539 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 UTP23Q9BRU9 249 aaKnown RBP13.15□□□□□ -0.3
SIX4-201ENST00000216513 GRHPRQ9UBQ7 328 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 LOC100509620A0A075B734 347 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 C1orf226A1L170 272 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 CXCR6O00574 342 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 IRF2P14316 349 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 CKMT2P17540 419 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 ZNF84P51523 738 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 GPX6P59796 221 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 DLX2Q07687 328 aaPredicted RBP13.15□□□□□ -0.3
SIX4-201ENST00000216513 TMPRSS11AQ6ZMR5 421 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 PLD6Q8N2A8 252 aaKnown RBP13.15□□□□□ -0.3
SIX4-201ENST00000216513 CCDC54Q8NEL0 328 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 NPLQ9BXD5 320 aaPredicted RBP13.15□□□□□ -0.3
SIX4-201ENST00000216513 UBAP1Q9NZ09 502 aa13.15□□□□□ -0.3
SIX4-201ENST00000216513 NKX1-2Q9UD57 310 aaPredicted RBP13.15□□□□□ -0.3
SIX4-201ENST00000216513 GON4LQ3T8J9 2241 aa13.15□□□□□ -0.31
SIX4-201ENST00000216513 COL18A1P39060 1754 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 PDYNP01213 254 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 BMP1P13497 986 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 TLDC1Q6P9B6 456 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 IL20RBQ6UXL0 311 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 USP30Q70CQ3 517 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 ARHGAP22Q7Z5H3 698 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 MYDGFQ969H8 173 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 SMIM14Q96QK8 99 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 SLC16A8O95907 504 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 DLSTP36957 453 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 UFM1P61960 85 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 DOC2AQ14183 400 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 MZT2AQ6P582 158 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 GPR137CQ8N3F9 429 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 MYRFLQ96LU7 910 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 IL4I1Q96RQ9 567 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 COMMD4Q9H0A8 199 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 NAALAD2Q9Y3Q0 740 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 APOL3O95236 402 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 SOX14O95416 240 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 CERS1P27544 350 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 MAN2A2P49641 1150 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 ANKFN1Q8N957 763 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms