RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 NFATC1O95644 943 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 PTHP01270 115 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 C9P02748 559 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 S100A5P33763 92 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 GRK3P35626 688 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 CLCNKAP51800 687 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 ITGA1P56199 1179 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 SELENOWP63302 87 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 HSPB3Q12988 150 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 MED22Q15528 200 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 OLIG3Q7RTU3 272 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 NANOGNBQ7Z5D8 188 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 ANKRD53Q8N9V6 530 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 TMIEQ8NEW7 156 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.52□□□□□ -0.416e-6■■■■■ 38.3
CTNS-201ENST00000046640 RAB8BQ92930 207 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 PPP1R16AQ96I34 528 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 NIPSNAP1Q9BPW8 284 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 TMEM106CQ9BVX2 250 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 OR52A5Q9H2C5 316 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 RERGLQ9H628 205 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 ERVK13-1Q9NX77 482 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 HCN2Q9UL51 889 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 PLXND1Q9Y4D7 1925 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 FAM227AF5H4B4 570 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 DSCR3O14972 297 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 SEC13P55735 322 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 UAP1L1Q3KQV9 507 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 GCNT6Q5T4J0 391 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 LAS2Q8IYD9 372 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 PARP16Q8N5Y8 322 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 ZNF675Q8TD23 568 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 SMARCD2Q92925 531 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 RAD51AP1Q96B01 352 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 TMEM245Q9H330 911 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 CCNB1IP1Q9NPC3 277 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 TAAR2Q9P1P5 351 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 PLEKHM1Q9Y4G2 1056 aa12.52□□□□□ -0.41
CTNS-201ENST00000046640 ANKDD1BA6NHY2 528 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 AGAP5A6NIR3 686 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 PLPP1O14494 284 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 PRAMEF10O60809 474 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 ACP5P13686 325 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 SOX9P48436 509 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 CDK6Q00534 326 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 GPM6BQ13491 265 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 WSCD2Q2TBF2 565 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 ARMCX4Q5H9R4 360 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 DEPDC1Q5TB30 811 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 AMER3Q8N944 861 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 C17orf50Q8WW18 174 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 JPH3Q8WXH2 748 aaPredicted RBP12.51□□□□□ -0.41
CTNS-201ENST00000046640 EXOSC8Q96B26 276 aaKnown RBP12.51□□□□□ -0.41
CTNS-201ENST00000046640 BHLHE41Q9C0J9 482 aaPredicted RBP12.51□□□□□ -0.41
CTNS-201ENST00000046640 GABARAPL1Q9H0R8 117 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 SLC6A17Q9H1V8 727 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 EXOSC4Q9NPD3 245 aaKnown RBP12.51□□□□□ -0.41
CTNS-201ENST00000046640 SLAMF7Q9NQ25 335 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 TAS2R9Q9NYW1 312 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 KCNK6Q9Y257 313 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 METTL15A6NJ78 407 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 GLOD5A6NK44 160 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 PI15O43692 258 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 GPR37L1O60883 481 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 TNFRSF21O75509 655 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 CHRM5P08912 532 aaPredicted RBP12.51□□□□□ -0.41
CTNS-201ENST00000046640 PCGF2P35227 344 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 CXCR4P61073 352 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 ZNF33BQ06732 778 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 ST3GAL4Q11206 333 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 EXOC3L2Q2M3D2 409 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 FAM71E1Q6IPT2 247 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 PNCKQ6P2M8 343 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 FBXO46Q6PJ61 603 aaPredicted RBP12.51□□□□□ -0.41
CTNS-201ENST00000046640 HOMEZQ8IX15 550 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 METTL4Q8N3J2 472 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 HCAR2Q8TDS4 363 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 GANCQ8TET4 914 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 EPHX3Q9H6B9 360 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 CXorf36Q9H7Y0 433 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 IMP3Q9NV31 184 aaKnown RBP12.51□□□□□ -0.41
CTNS-201ENST00000046640 ATP6V1HQ9UI12 483 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 LYVE1Q9Y5Y7 322 aa12.51□□□□□ -0.41
CTNS-201ENST00000046640 A0A1W2PP55 124 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 FOXE1O00358 373 aaPredicted RBP12.5□□□□□ -0.41
CTNS-201ENST00000046640 CTDSP2O14595 271 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 PCDH17O14917 1159 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 RGS5O15539 181 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 ASNA1O43681 348 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 PRKRAO75569 313 aaKnown RBP12.5□□□□□ -0.41
CTNS-201ENST00000046640 TBX6O95947 436 aaPredicted RBP12.5□□□□□ -0.41
CTNS-201ENST00000046640 ALPPL2P10696 532 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 MAT2AP31153 395 aaKnown RBP12.5□□□□□ -0.41
CTNS-201ENST00000046640 MAPK12P53778 367 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 COPZ1P61923 177 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 CDK3Q00526 305 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 DUSP7Q16829 419 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 CCBE1Q6UXH8 406 aaPredicted RBP12.5□□□□□ -0.41
CTNS-201ENST00000046640 ZNF605Q86T29 641 aa12.5□□□□□ -0.41
CTNS-201ENST00000046640 C17orf64Q86WR6 236 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms