RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 IGKV3D-11A0A0A0MRZ8 115 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 IGHV1-45A0A0A0MS14 117 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 SLC28A1O00337 649 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 CLDN4O14493 209 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 DYNC1I1O14576 645 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 ANXA4P09525 319 aaPredicted RBP11.3□□□□□ -0.6
SYPL1-201ENST00000011473 FAM87AP0C7U9 286 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 NR2F6P10588 404 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 TIA1P31483 386 aaKnown RBP eCLIP11.3□□□□□ -0.63e-8■■■■■ 28.4
SYPL1-201ENST00000011473 BUD31P41223 144 aaPredicted RBP11.3□□□□□ -0.6
SYPL1-201ENST00000011473 CCL11P51671 97 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 TAS2R50P59544 299 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 KIAA0040Q15053 153 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 XKR7Q5GH72 579 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 VWA5B1Q5TIE3 1220 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 CPEB2Q7Z5Q1 589 aaKnown RBP11.3□□□□□ -0.6
SYPL1-201ENST00000011473 SCUBE1Q8IWY4 988 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 ZNF595Q8IYB9 648 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 PLPP5Q8NEB5 264 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 LRRC8CQ8TDW0 803 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 DOK4Q8TEW6 326 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 EGLN2Q96KS0 407 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 LYARQ9NX58 379 aaKnown RBP11.3□□□□□ -0.6
SYPL1-201ENST00000011473 ADAM29Q9UKF5 820 aa11.3□□□□□ -0.6
SYPL1-201ENST00000011473 RALYQ9UKM9 306 aaKnown RBP11.3□□□□□ -0.6
SYPL1-201ENST00000011473 MRPS33Q9Y291 106 aaKnown RBP11.3□□□□□ -0.6
SYPL1-201ENST00000011473 KMT2BQ9UMN6 2715 aaPredicted RBP11.29□□□□□ -0.6
SYPL1-201ENST00000011473 CACNA1BQ00975 2339 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 NSG1A0A0A6YYJ2 146 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 IL3P08700 152 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 TACR1P25103 407 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 TLX1P31314 330 aaPredicted RBP11.29□□□□□ -0.6
SYPL1-201ENST00000011473 ALDH9A1P49189 494 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 HSD17B7P56937 341 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 OR4D2P58180 307 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 FOLH1Q04609 750 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 Q0VFX4 171 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 STX4Q12846 297 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 PCOLCEQ15113 449 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 ZNF750Q32MQ0 723 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 SFT2D3Q587I9 215 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 NOXRED1Q6NXP6 359 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 FAM47EQ6ZV65 393 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 TRIM42Q8IWZ5 723 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 PARP9Q8IXQ6 854 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 RAB3IL1Q8TBN0 382 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 APOBEC4Q8WW27 367 aaKnown RBP11.29□□□□□ -0.6
SYPL1-201ENST00000011473 ANKRD9Q96BM1 317 aaPredicted RBP11.29□□□□□ -0.6
SYPL1-201ENST00000011473 TM4SF18Q96CE8 201 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 TUBGCP3Q96CW5 907 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 CATSPER2Q96P56 530 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 WDR77Q9BQA1 342 aaPredicted RBP11.29□□□□□ -0.6
SYPL1-201ENST00000011473 C1orf50Q9BV19 199 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 MED4Q9NPJ6 270 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 PNO1Q9NRX1 252 aaKnown RBP11.29□□□□□ -0.6
SYPL1-201ENST00000011473 C1orf109Q9NX04 203 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 MS4A12Q9NXJ0 267 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 HEY2Q9UBP5 337 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 MCM8Q9UJA3 840 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 HAO1Q9UJM8 370 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 LHX6Q9UPM6 363 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 LOC102723996A0A087X1L8 192 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 TCRBV16S1A1N1A0A5B0 115 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 KLF11O14901 512 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 ATP8B1O43520 1251 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 CTNSO60931 367 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 IGHEP01854 428 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 PTGER1P34995 402 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 HK2P52789 917 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 POLE2P56282 527 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 LINC00303Q3SY05 128 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 GALNT18Q6P9A2 607 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 CLEC1AQ8NC01 280 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 CLHC1Q8NHS4 586 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 ADAMTS18Q8TE60 1221 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 C16orf78Q8WTQ4 265 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 GFM2Q969S9 779 aaKnown RBP11.29□□□□□ -0.6
SYPL1-201ENST00000011473 NACC2Q96BF6 587 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 PPWD1Q96BP3 646 aaKnown RBP11.29□□□□□ -0.6
SYPL1-201ENST00000011473 ALOXE3Q9BYJ1 711 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 BAIAP2L1Q9UHR4 511 aa11.29□□□□□ -0.6
SYPL1-201ENST00000011473 MYO1DO94832 1006 aa11.28□□□□□ -0.6
SYPL1-201ENST00000011473 IFNA16P05015 189 aa11.28□□□□□ -0.6
SYPL1-201ENST00000011473 ZNF763Q0D2J5 394 aa11.28□□□□□ -0.6
SYPL1-201ENST00000011473 PAPD4Q6PIY7 484 aaKnown RBP11.28□□□□□ -0.6
SYPL1-201ENST00000011473 RNF165Q6ZSG1 346 aa11.28□□□□□ -0.6
SYPL1-201ENST00000011473 MED25Q71SY5 747 aa11.28□□□□□ -0.6
SYPL1-201ENST00000011473 NDUFAF7Q7L592 441 aa11.28□□□□□ -0.6
SYPL1-201ENST00000011473 TMEM102Q8N9M5 508 aaPredicted RBP11.28□□□□□ -0.6
SYPL1-201ENST00000011473 FNDC5Q8NAU1 212 aa11.28□□□□□ -0.6
SYPL1-201ENST00000011473 DNAJB14Q8TBM8 379 aa11.28□□□□□ -0.6
SYPL1-201ENST00000011473 TTC9Q92623 222 aa11.28□□□□□ -0.6
SYPL1-201ENST00000011473 TSSK3Q96PN8 268 aa11.28□□□□□ -0.6
SYPL1-201ENST00000011473 ARHGAP9Q9BRR9 750 aa11.28□□□□□ -0.6
SYPL1-201ENST00000011473 C19orf25Q9UFG5 118 aaPredicted RBP11.28□□□□□ -0.6
SYPL1-201ENST00000011473 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.28□□□□□ -0.6
SYPL1-201ENST00000011473 MMACHCQ9Y4U1 282 aa11.28□□□□□ -0.6
SYPL1-201ENST00000011473 SCN2AQ99250 2005 aa11.28□□□□□ -0.6
SYPL1-201ENST00000011473 GOLGA8QA0A0J9YX86 632 aa11.27□□□□□ -0.6
SYPL1-201ENST00000011473 GOLGA8OA6NCC3 632 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms