RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Casc4Q6P2L7 435 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Hmgb4Q6P8W9 181 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Zfp429Q7M6Y0 485 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Wdr91Q7TMQ7 748 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Hpcal4Q8BGZ1 191 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Q8BHR8 331 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Armcx3Q8BHS6 379 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Btbd6Q8K2J9 488 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Slc8a2Q8K596 921 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Olfr1346Q8VGH6 313 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Olfr676Q8VGZ9 317 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Cog2Q921L5 731 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 CmasQ99KK2 432 aaKnown RBP6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Atoh8Q99NA2 322 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Lrrc40Q9CRC8 602 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 OoepQ9CWE6 164 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Etv5Q9CXC9 510 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Hddc3Q9D114 179 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Gstt4Q9D4P7 240 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Rnf138rt1Q9D9M9 248 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 H2-OaQ9QWV1 250 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Dnajb9Q9QYI6 222 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Med20Q9R0X0 212 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Smarcb1Q9Z0H3 385 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Pld1Q9Z280 1074 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Bscl2Q9Z2E9 383 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Myo15bI7HPW8 3033 aa6.47□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Col6a3E9PWQ3 3284 aa6.46□□□□□ -1.37
Ccdc54-201ENSMUST00000062439 Igkv16-104A0A0B4J1I1 116 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Olfr391-psA0A0U1RNJ4 312 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Ttc13A0A1L1SSC7 844 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 A0A1L1SV24 88 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Klhdc7bA0A286YD60 1263 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Zfp973A2BE20 318 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Vmn2r115E9Q0E7 857 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Gm7275E9Q1B3 247 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Zfp961E9Q4R5 444 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Olfr1354E9Q5G9 310 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Pate1E9Q658 125 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Kcnk16G5E845 292 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 4930544D05RikJ3QK56 214 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Vmn2r15L7N2A0 855 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Trappc3O55013 180 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 CyctP00015 105 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Odc1P00860 461 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Gm5571P01639 130 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Fgf3P05524 245 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Chmp6P0C0A3 200 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Defa-rs2P17534 91 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Abcd1P48410 736 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 CtdsplP58465 276 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 HmmrQ00547 794 aaKnown RBP6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Ica1lQ3TY65 431 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Serac1Q3U213 654 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Bbof1Q3V079 533 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 TrmoQ562D6 431 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Hif1aQ61221 836 aaKnown RBP6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 HadhQ61425 314 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 DazlQ64368 298 aaKnown RBP6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Adck2Q6NSR3 617 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Zfp251Q6PCX8 632 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Tas2r114Q7M722 309 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Zdhhc19Q810M5 347 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Aste1Q8BIR2 672 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Nipal1Q8BMW7 416 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Afap1l1Q8BZI0 768 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Zbtb6Q8K088 423 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 HinfpQ8K1K9 503 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Gpat4Q8K2C8 456 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Ubqln1Q8R317 582 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Ppp1r14cQ8R4S0 164 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Luzp1Q8R4U7 1068 aaKnown RBP6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Tubg2Q8VCK3 451 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Slc35c2Q8VCX2 364 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Olfr1499Q8VG65 314 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Olfr131Q8VGC8 314 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Ccdc65Q8VHI7 493 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Gpx4Q91XR9 253 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 MrgpreQ91ZB7 310 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Sfxn1Q99JR1 322 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Zfp810Q99K45 461 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 CalcbQ99MP3 130 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Fdx2Q9CPW2 174 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Mtif3Q9CZD5 276 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Trmt10bQ9D075 318 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Cdkn2aipnlQ9D211 116 aaKnown RBP6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Atad1Q9D5T0 361 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 March8Q9DBD2 286 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 AcadsbQ9DBL1 432 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Tlr2Q9QUN7 784 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Rnf103Q9R1W3 683 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Hao1Q9WU19 370 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Tnrc18Q80WC3 2878 aa6.46□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Syndig1A2ANU3 258 aa6.45□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Tmem215A7E1Z1 235 aa6.45□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Gm5934D3Z4U6 212 aa6.45□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 CenpaO35216 134 aa6.45□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Cd8aP01731 247 aa6.45□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Prl2c3P04768 224 aa6.45□□□□□ -1.38
Ccdc54-201ENSMUST00000062439 Slc3a2P10852 526 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms