RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Vmn2r20L7N2B1 853 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Sbk2P0C5K1 362 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Fv4P11370 679 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Pou4f2Q63934 411 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tktl1Q99MX0 595 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rhox9Q9EQM5 227 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Hebp2Q9WU63 205 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr640E9Q7P5 314 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Vmn2r45L7N2B5 852 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 EporP14753 507 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cd28P31041 218 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ccr3P51678 359 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cntn5P68500 1098 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 ArvcfP98203 962 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Pnliprp1Q5BKQ4 473 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Fcrl5Q68SN8 596 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Nlgn2Q69ZK9 836 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Kng2Q6S9I3 644 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr885Q7TRE0 309 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr667Q7TRP4 326 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Fndc9Q8BJN4 226 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Mon1bQ8BMQ8 553 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cndp1Q8BUG2 492 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Dclk1Q9JLM8 756 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Btbd2E9PUS2 523 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 F6Y6L6 278 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 1700017D01RikG5E851 209 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gabra3P26049 492 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Abcb7Q61102 752 aaKnown RBP11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Zfand1Q8BFR6 268 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr350Q8VFP8 312 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Macrod1Q922B1 323 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Slc25a11Q9CR62 314 aaKnown RBP11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rtl8cQ9D6I0 112 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ahnak2E9PYB0 1738 aaKnown RBP11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tcte3P11985 191 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Igfbp1P47876 272 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Actc1P68033 377 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Acta1P68134 377 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr533Q7TRT7 320 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 IrgcQ8C262 412 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 FntbQ8K2I1 437 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Actr1bQ8R5C5 376 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lnx2Q91XL2 687 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Exosc5Q9CRA8 235 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr671A0A1B0GSN5 317 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 ThP24529 498 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 PrkcgP63318 697 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Shox2P70390 331 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Adra1bP97717 514 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Itpripl2Q3UV16 535 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Krt33bQ61897 404 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Map4k5Q8BPM2 847 aaKnown RBP11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Hs3st5Q8BSL4 346 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Trmt5Q9D0C4 501 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rad18Q9QXK2 509 aaKnown RBP11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Olfr1306A2BFL7 312 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Six3Q62233 333 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Rhbdf1Q6PIX5 856 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Xylt1Q811B1 953 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Pamr1Q8BU25 720 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tmem5Q8VDX6 444 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gm26657Q9CVR1 127 aa11.53□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gm21936A0A1Y7VJE9 144 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Ssxa1B1AUS7 101 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Tp63O88898 680 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Gad2P48320 585 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Adgre1Q61549 931 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 NelfaQ8BG30 530 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Slc41a2Q8BYR8 573 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lrrc56Q8K375 552 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Lsm1Q8VC85 133 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Borcs7Q9CRC6 105 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Sult4a1P63046 284 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cd163Q2VLH6 1121 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Slco6c1Q8C0X7 706 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 MslnlQ8C160 685 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Angptl7Q8R1Q3 337 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cdkn2aipnlQ9D211 116 aaKnown RBP11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Bace2Q9JL18 514 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Polg2Q9QZM2 459 aa11.52□□□□□ -0.56
Trim56-201ENSMUST00000054384 Cldn34b1B1AZQ8 209 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 CckbrP56481 453 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Galk2Q68FH4 458 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Lamp3Q7TST5 411 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cfap20Q8BTU1 193 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Fads1Q920L1 447 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 EtfdhQ921G7 616 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cldn34b2Q9D9N2 209 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cldn24D3YXJ9 220 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Uba1Q02053 1058 aaKnown RBP11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 CcnjQ3TZI6 379 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Nol9Q3TZX8 714 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Slc22a18Q78KK3 406 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Spata7Q80VP2 582 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Dpep2Q8C255 478 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Hmgcs1Q8JZK9 520 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 AcmsdQ8R519 336 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cdhr1Q8VHP6 859 aa11.52□□□□□ -0.57
Trim56-201ENSMUST00000054384 Cdkal1Q91WE6 578 aa11.52□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms