RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Tbx5P70326 518 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Lasp1Q61792 263 aaKnown RBP16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Asb8Q91ZT9 288 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fundc2Q9D6K8 151 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Slc30a4O35149 430 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Chrna4O70174 629 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Kctd9Q80UN1 339 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ap5m1Q8BJ63 490 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Emc1Q8C7X2 997 aaKnown RBP16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ctrb1Q9CR35 263 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cdh10P70408 788 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cnn2Q08093 305 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cpxcr1Q3V0P1 322 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ostf1Q62422 215 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Tpgs2Q66JT5 296 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr885Q7TRE0 309 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 DpcdQ8BPA8 203 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Abcb8Q9CXJ4 717 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm21904A8HG57 180 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm21866J3QMH4 180 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gad2P48320 585 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 F8a1Q00558 380 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rnf130Q8VEM1 419 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 SardhQ99LB7 919 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 DenrQ9CQJ6 198 aaKnown RBP16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fcf1Q9CTH6 198 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Klhdc7bA0A286YD60 1263 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Skint7A7XV04 395 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ssxa1B1AUS7 101 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 CK137956B1AYM9 596 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Klhl21Q3U410 597 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gtpbp2Q3UJK4 602 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Pcsk7Q61139 770 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Tfap2bQ61313 459 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ptges2Q8BWM0 384 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gramd1cQ8CI52 457 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Nwd2Q6P5U7 1742 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Xpnpep1Q6P1B1 623 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Slc26a9Q8BU91 790 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Washc1Q8VDD8 475 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Msantd3Q9CR78 275 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gtpbp8Q9CY28 285 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Heg1E9Q7X6 1337 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Adhfe1Q8R0N6 465 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Hsd3b7Q9EQC1 369 aa16.01■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Kcnj9P48543 393 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ccdc74aE9Q9U8 364 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 JunbP09450 344 aaKnown RBP16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Kcnc1P15388 511 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rph3aP47708 681 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 NfascQ810U3 1240 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 BC024139Q8BVJ3 772 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Q8R3Y5 413 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr1253A2AUA2 318 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm12789B1AUV7 164 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 TyrobpO54885 114 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Pdlim1O70400 327 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cd68P31996 326 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr1251Q7TQZ3 318 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cpne5Q8JZW4 593 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 B3galt5Q9JI67 308 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Tcea2Q9QVN7 299 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Nxpe3B9EKK6 559 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Tmem44E9Q4M0 433 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 S1pr1O08530 382 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Sap18O55128 153 aaKnown RBP16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gdf6P43028 454 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 UnklQ5FWH2 727 aaKnown RBP16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr1385Q7TQT1 309 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Kctd12bQ8C7J6 292 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr273Q8VG87 317 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Upf1Q9EPU0 1124 aaKnown RBP16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Dap3Q9ER88 391 aaKnown RBP16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Nup153E9Q3G8 1462 aaKnown RBP16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ift22Q9DAI2 185 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Stub1Q9WUD1 304 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr619E9PV95 320 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Vmn2r116E9Q6I0 856 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ech1O35459 327 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Itm2aQ61500 263 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Adgrg2Q8CJ12 1009 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 ApofQ91V80 315 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Mrgprb4Q91ZC0 321 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Pycr2Q922Q4 320 aaKnown RBP16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Twist2Q9D030 160 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Grik2P39087 908 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Eif5a2Q8BGY2 153 aaKnown RBP16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ccm2lQ8VCC6 481 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Lipt1Q8VCM4 373 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fam3bQ9D309 235 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 GltpQ9JL62 209 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Arrdc4A0A0B4J1F4 415 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Vmn2r56E9Q4U5 779 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Xkr6E9Q6C8 638 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Slc10a5Q5PT54 434 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr1299Q7TQX5 312 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fem1abQ8C0T1 654 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 B4galt7Q8R087 327 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Kcnc4Q8R1C0 628 aa16■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Golga7Q91W53 137 aa16■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms