RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Hao2Q9NYQ2 353 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 RbpmsQ9WVB0 197 aaKnown RBP9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cylc1A0A1B0GR13 642 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Vmn2r101E9PZS9 857 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 SgceO70258 437 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Scrg1O88745 98 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Klk1b8P07628 261 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 UoxP25688 303 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Bdkrb2P32299 392 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 HmgclP38060 325 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Fubp3Q3TIX6 575 aaKnown RBP9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ift52Q62559 426 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Rxfp4Q7TQP4 414 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 NrmQ8VC65 262 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gimap3Q99MI6 301 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 B3galt5Q9JI67 308 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Dio2Q9Z1Y9 266 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc30a4O35149 430 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cyp4a10O88833 509 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 EgfP01132 1217 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cdk1P11440 297 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Snrpd2P62317 118 aaKnown RBP9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ms4a15Q3UPL6 245 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Sox17Q61473 419 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Vamp1Q62442 118 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 GnalQ8CGK7 381 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 AdprmQ99KS6 340 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Hddc3Q9D114 179 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Q9D454 513 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc34a2Q9DBP0 697 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gm3604A0A087WPN2 559 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Vmn2r116E9Q6I0 856 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Arl9F7BE40 171 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Rgs7O54829 469 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Adra1bP97717 514 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gls2Q571F8 602 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Phlda1Q62392 405 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr1101Q7TR59 310 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cdh7Q8BM92 785 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Plekha1Q8BUL6 383 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr165Q8VFA2 313 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Spcs2Q9CYN2 226 aaKnown RBP9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 1700080O16RikQ9D9G4 284 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cdc20Q9JJ66 499 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 B9d1Q9R1S0 204 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gm5493S4R2D1 92 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Myh11O08638 1972 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 6720489N17RikA0A1Y7VJW0 127 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr1511E9PWU0 318 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr1510E9PZZ6 318 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Malt1Q2TBA3 832 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Nell1Q2VWQ2 810 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Eef2kmtQ3UZW7 335 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Dyrk2Q5U4C9 599 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Otud7aQ8R554 926 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ccm2lQ8VCC6 481 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ankrd54Q91WK7 299 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Q9CPZ3 230 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Lrrc18Q9CQ07 262 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Hsbp1Q9CQZ1 76 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Med31Q9CXU1 131 aaKnown RBP9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 HhatlQ9D1G3 503 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Usp21Q9QZL6 566 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Polg2Q9QZM2 459 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ighv11-2A0A075B5R8 117 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tomm5B1AXP6 51 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gm10720D3Z1I5 223 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Vmn2r110E9PWD5 858 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Adam3F8VQ03 822 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Il12aP43431 215 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 AcadmP45952 421 aaKnown RBP9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Irf7P70434 457 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 TsxP70675 144 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Fam198bQ3UPI1 517 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Esrp1Q3US41 680 aaKnown RBP9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Sh2d1b2Q45HK4 132 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 HlxQ61670 476 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Pou4f2Q63934 411 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 AptxQ7TQC5 342 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Lamp3Q7TST5 411 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Zmpste24Q80W54 475 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tm9sf4Q8BH24 643 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gpr1Q8K087 353 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 ManbaQ8K2I4 879 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mettl22Q8R1C6 393 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr686Q8VGX3 317 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Isca2Q9DCB8 154 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Avpr1bQ9WU02 421 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Zfp383A0A087WRR7 490 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cldn34b1B1AZQ8 209 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Oaz2O08608 189 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Bcl2a1dO55179 172 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Zfp60P16374 707 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tap2P36371 702 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 TtlP38585 377 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gm648Q3UJ22 213 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Taar7aQ5QD12 358 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr1477Q7TQQ7 315 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mgat4bQ812F8 548 aa9.78□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cacul1Q8R0X2 377 aa9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms