RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gabrb1P50571 474 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Rras2P62071 204 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Neurog1P70660 244 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Pitx2P97474 317 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Bfsp2Q6NVD9 416 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cpsf6Q6NVF9 551 aaKnown RBP16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Supv3l1Q80YD1 779 aaKnown RBP16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cd99l2Q8BIF0 237 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Tmem200aQ8C817 491 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Eef1e1Q9D1M4 174 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Dmac2Q9D7K5 258 aaKnown RBP16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Lrrc69Q9D9Q0 347 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Slc25a14Q9Z2B2 325 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm28576A0A087WRP6 222 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm7697A0A0J9YUH2 350 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm9495A0A0J9YUZ3 350 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gp1baO35930 734 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Reps1O54916 795 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cd83O88324 196 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cers1P27545 350 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Muc1Q02496 630 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Zik1Q80YP6 463 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Padi6Q8K3V4 682 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Mrps5Q99N87 432 aaKnown RBP16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 1700029P11RikQ9CQ68 150 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cdc42ep5Q9Z0X0 150 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Olfr566A0A1B0GST0 319 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Olfr1123A2AT85 323 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm8334F7CD45 553 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 S100a6P14069 89 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gdi2Q61598 445 aaKnown RBP16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 OmpQ64288 163 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm5416Q6IE28 97 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 ManeaQ6NXH2 462 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Tm9sf4Q8BH24 643 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 B3gnt7Q8K0J2 397 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 HnrnplQ8R081 586 aaKnown RBP16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Use1Q9CQ56 270 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Syt11Q9R0N3 430 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Lzts3A2AHG0 700 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Nipsnap3aB1AWZ3 247 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Smad6O35182 495 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 IlkO55222 452 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Polr1cP52432 346 aaKnown RBP16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Fgf9P54130 208 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Q3U7U4 132 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Ube2j2Q6P073 259 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Dalrd3Q6PJN8 538 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cox10Q8CFY5 443 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Fahd1Q8R0F8 227 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Olfr1284Q8VF29 311 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Sec23bQ9D662 767 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Olfr704Q9EPF6 315 aa16.13■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Ankrd60A2AMD2 318 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm14459A2BI73 179 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Fam151bD3YUE4 279 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Olfr564E9PWA8 316 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm8369E9PZI3 166 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Naa11Q3UX61 218 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Tex261Q62302 196 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Tas2r140Q7TQA4 312 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Olfr986Q8VFN6 312 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Olfr532Q8VGT4 309 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Mapk11Q9WUI1 364 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Trmt1lA2RSY6 728 aaKnown RBP16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm21833J3QPK1 500 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Nr2f6P43136 390 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Hepacam2Q4VAH7 463 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Rassf5Q5EBH1 413 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Ltbp3Q61810 1268 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 NanogQ80Z64 305 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Glb1lQ8VC60 646 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cts3Q91ZD5 332 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cstf3Q99LI7 717 aaKnown RBP16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cyp4f13Q99N19 523 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 2310003L06RikQ9CV82 495 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Snapc3Q9D2C9 407 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Rsph9Q9D9V4 276 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Fbxo47A2A6H3 451 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Htr7P32304 448 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 IqcmQ149I8 489 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Hus1Q8BQY8 280 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Znf786Q8BV42 777 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Treml1Q8K558 317 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Olfr818Q8VG46 318 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Slc41a3Q921R8 488 aa16.12■□□□□ 0.17
Ctcf-201ENSMUST00000005841 4930433I11RikA0A0U1RPT6 723 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 4930444G20RikD3Z741 495 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 LipcP27656 510 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Ica1P97411 478 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 PtprjQ64455 1238 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Tmem202Q80W35 275 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Slc45a1Q8BIV7 751 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 NdnfQ8C119 568 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Dpep2Q8C255 478 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Coro6Q920M5 471 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Trappc2Q9CQP2 140 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gpr88Q9EPB7 384 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Alyref2Q9JJW6 218 aa16.11■□□□□ 0.17
Ctcf-201ENSMUST00000005841 H2-BlV9GXR0 257 aa16.11■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms