RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 NELL2Q99435 816 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 FKBP14Q9NWM8 211 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 DHRS7Q9Y394 339 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 A3GALT2U3KPV4 340 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 ARID1BQ8NFD5 2236 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-227ENST00000640957 TRBV4-1A0A0J9YWV2 114 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 OR10H3O60404 316 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 GADD45GO95257 159 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 C1QBP02746 253 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 GABRB1P18505 474 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 LRIF1Q5T3J3 769 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 DDI2Q5TDH0 399 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 UNC5DQ6UXZ4 953 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 SZRD1Q7Z422 152 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 GALNT7Q86SF2 657 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 SETD6Q8TBK2 473 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 DOHHQ9BU89 302 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 TRAF4Q9BUZ4 470 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-227ENST00000640957 TRIM62Q9BVG3 475 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 PRDM5Q9NQX1 630 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-227ENST00000640957 ZFP37Q9Y6Q3 630 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-227ENST00000640957 TMEM229AB2RXF0 380 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 NTN1O95631 604 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 EPORP19235 508 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 RPS5P46782 204 aaKnown RBP13.15□□□□□ -0.3
SCARB2-227ENST00000640957 EPHA5P54756 1037 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 RRAS2P62070 204 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-227ENST00000640957 CRYZQ08257 329 aaKnown RBP13.15□□□□□ -0.3
SCARB2-227ENST00000640957 IL10RBQ08334 325 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 RBBP4Q09028 425 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 ASAH1Q13510 395 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 TAF1AQ15573 450 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-227ENST00000640957 ALG1LQ6GMV1 187 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 BRAT1Q6PJG6 821 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 SLC51BQ86UW2 128 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.15□□□□□ -0.35e-8■■■■□ 23.5
SCARB2-227ENST00000640957 SMG7Q92540 1137 aaKnown RBP13.15□□□□□ -0.3
SCARB2-227ENST00000640957 FBXW5Q969U6 566 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 ASIC4Q96FT7 647 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 C8orf48Q96LL4 319 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 PPP1R2P1Q96PQ5 205 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 CSNK1G1Q9HCP0 422 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 TMEM248Q9NWD8 314 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 RDH8Q9NYR8 311 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 IL20RAQ9UHF4 553 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 LRFN2Q9ULH4 789 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 SPATA2Q9UM82 520 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 CD8B2A6NJW9 211 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 ALPPP05187 535 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 CD8BP10966 210 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 ETV5P41161 510 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 ETV1P50549 477 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 XKR4Q5GH76 650 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 PRSS55Q6UWB4 352 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-227ENST00000640957 KANSL1Q7Z3B3 1105 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 DEFB128Q7Z7B8 93 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 C9orf62Q8N4C0 152 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 CIDECQ96AQ7 238 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-227ENST00000640957 MED8Q96G25 268 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 TRIB3Q96RU7 358 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 TSSK6Q9BXA6 273 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 NMNAT1Q9HAN9 279 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-227ENST00000640957 ZNF236Q9UL36 1845 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 A0A0U1RQF3 1178 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 GABRR3A8MPY1 467 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 SH3BP5O60239 455 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 PRAMEF11O60813 436 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 CH25HO95992 272 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 CTGFP29279 349 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 CLCN4P51793 760 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 MAP2K6P52564 334 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 MICAQ29983 383 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 ZBTB37Q5TC79 503 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 DEF8Q6ZN54 512 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 PLCZ1Q86YW0 608 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 OR4A15Q8NGL6 344 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 GABARAPL3Q9BY60 117 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 C3orf14Q9HBI5 128 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 NUDT15Q9NV35 164 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 EIF3KQ9UBQ5 218 aaKnown RBP13.14□□□□□ -0.31
SCARB2-227ENST00000640957 TRAPPC4Q9Y296 219 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 A0A0A6YYJ9 748 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 ZNF670-ZNF695F2Z2N8 137 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 TRIM77I1YAP6 450 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 TLR4O00206 839 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 CLDN7O95471 211 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 CSNK1DP48730 415 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 WNT3P56703 355 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 CHIT1Q13231 466 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 GALEQ14376 348 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 BHLHB9Q6PI77 547 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 MMP21Q8N119 569 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 WFDC6Q9BQY6 131 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 KATNB1Q9BVA0 655 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 ADGRE3Q9BY15 652 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 MRPL15Q9P015 296 aaKnown RBP13.14□□□□□ -0.31
SCARB2-227ENST00000640957 CRLS1Q9UJA2 301 aa13.14□□□□□ -0.31
SCARB2-227ENST00000640957 EXO1Q9UQ84 846 aaKnown RBP13.14□□□□□ -0.31
SCARB2-227ENST00000640957 A0A075B6Q4 140 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 GRXCR2A6NFK2 248 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms