RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 STIM1Q13586 685 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 CARTPTQ16568 116 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 KLHL40Q2TBA0 621 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 HIKESHIQ53FT3 197 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 ESCO2Q56NI9 601 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 CARD17Q5XLA6 110 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 KDM7AQ6ZMT4 941 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 ANKRD46Q86W74 232 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 MEX3DQ86XN8 651 aaKnown RBP6.9□□□□□ -1.3
NECAP1-220ENST00000639841 PLA2G4DQ86XP0 818 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 C1orf210Q8IVY1 113 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 GPR135Q8IZ08 494 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 SLC7A5P1Q8MH63 180 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 OR9K2Q8NGE7 335 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 MCHR2Q969V1 340 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 ZBTB8AQ96BR9 441 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 STAMBPL1Q96FJ0 436 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 MSANTD3Q96H12 275 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 IGSF21Q96ID5 467 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 C7orf34Q96L11 122 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 GFI1Q99684 422 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 SLC2A4RGQ9NR83 387 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 GINS2Q9Y248 185 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 REV3LO60673 3130 aa6.9□□□□□ -1.3
NECAP1-220ENST00000639841 ZFHX2Q9C0A1 2572 aaPredicted RBP6.9□□□□□ -1.31
NECAP1-220ENST00000639841 ANKRD30BLA7E2S9 258 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 KLF11O14901 512 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 ATP2C2O75185 946 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 HTR2AP28223 471 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 PRDX2P32119 198 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 MAPK12P53778 367 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 MSLNQ13421 630 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 XRCC4Q13426 336 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 CNGA3Q16281 694 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 C6orf10Q5SRN2 563 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 ALS2CLQ60I27 953 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 PLEKHA7Q6IQ23 1121 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 ZNF704Q6ZNC4 412 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 LRRC55Q6ZSA7 311 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 CCDC190Q86UF4 302 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 LONP2Q86WA8 852 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 KATNAL2Q8IYT4 538 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 UBE2J2Q8N2K1 259 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 METTL13Q8N6R0 699 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 LINC01465Q8N7H1 131 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 OR6C1Q96RD1 312 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 RIT2Q99578 217 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 SPATA25Q9BR10 227 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 ALKBH7Q9BT30 221 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 C6orf50Q9HD87 102 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 ANKRD10Q9NXR5 420 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 DLL3Q9NYJ7 618 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 OR14J1Q9UGF5 321 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 CLUHO75153 1309 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 KANSL1LA0AUZ9 987 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 TYW5A2RUC4 315 aaKnown RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 A8MUI8 341 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 F8VZ95 297 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 FOXE1O00358 373 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 STBD1O95210 358 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 LUC7L3O95232 432 aaKnown RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 PROS1P07225 676 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 CD63P08962 238 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 CEBPBP17676 345 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 PCMT1P22061 227 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 CD1BP29016 333 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 MARCKSP29966 332 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 HTR2BP41595 481 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 GRIA1P42261 906 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 NSFP46459 744 aaKnown RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 CYP2J2P51589 502 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 NLRP11P59045 1033 aaKnown RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 IRX4P78413 519 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 NHLH2Q02577 135 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 NCBP1Q09161 790 aaKnown RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 ITGB3BPQ13352 177 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 ZRSR1Q15695 479 aaKnown RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 KIF19Q2TAC6 998 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 FAM159AQ6UWV7 190 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 YRDCQ86U90 279 aaKnown RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 KRTAP1-3Q8IUG1 177 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 CCDC60Q8IWA6 550 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 BEST2Q8NFU1 509 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 SLC26A7Q8TE54 656 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 ADAMTS14Q8WXS8 1223 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 MAP4K1Q92918 833 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 SFXN2Q96NB2 322 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 SF3B5Q9BWJ5 86 aaKnown RBP6.89□□□□□ -1.31
NECAP1-220ENST00000639841 RHBGQ9H310 441 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 DPP3Q9NY33 737 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 RHCGQ9UBD6 479 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 ERVK-11Q9UQG0 969 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 ATG4BQ9Y4P1 393 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 FANCMQ8IYD8 2048 aa6.89□□□□□ -1.31
NECAP1-220ENST00000639841 SUPT3HB4E1H0 165 aa6.88□□□□□ -1.31
NECAP1-220ENST00000639841 KRT86O43790 486 aa6.88□□□□□ -1.31
NECAP1-220ENST00000639841 SSX4O60224 188 aa6.88□□□□□ -1.31
NECAP1-220ENST00000639841 GLUD1P00367 558 aa6.88□□□□□ -1.31
NECAP1-220ENST00000639841 RRASP10301 218 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms