RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 HFE2Q6ZVN8 426 aa11.5□□□□□ -0.57
CAPN3-221ENST00000638141 VTCN1Q7Z7D3 282 aa11.5□□□□□ -0.57
CAPN3-221ENST00000638141 PDZD3Q86UT5 571 aa11.5□□□□□ -0.57
CAPN3-221ENST00000638141 NUDT8Q8WV74 236 aa11.5□□□□□ -0.57
CAPN3-221ENST00000638141 NDRG1Q92597 394 aaKnown RBP11.5□□□□□ -0.57
CAPN3-221ENST00000638141 NSMAFQ92636 917 aa11.5□□□□□ -0.57
CAPN3-221ENST00000638141 TADA1Q96BN2 335 aa11.5□□□□□ -0.57
CAPN3-221ENST00000638141 MYO19Q96H55 970 aa11.5□□□□□ -0.57
CAPN3-221ENST00000638141 TRPM7Q96QT4 1865 aa11.5□□□□□ -0.57
CAPN3-221ENST00000638141 GPR20Q99678 358 aa11.5□□□□□ -0.57
CAPN3-221ENST00000638141 EQTNQ9NQ60 294 aa11.5□□□□□ -0.57
CAPN3-221ENST00000638141 UBQLN1Q9UMX0 589 aaKnown RBP11.5□□□□□ -0.57
CAPN3-221ENST00000638141 ZAR1LA6NP61 321 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 GTPBP1O00178 669 aaKnown RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 KPNA3O00505 521 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 PIRO00625 290 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 NUPL2O15504 423 aaKnown RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 SLC19A2O60779 497 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 C22orf31O95567 290 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 SSTR2P30874 369 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 FGF9P31371 208 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 RORAP35398 523 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 NNMTP40261 264 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 GSTM5P46439 218 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 AGTR2P50052 363 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 RPL38P63173 70 aaKnown RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 MXD1Q05195 221 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 CACNB2Q08289 660 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 SP140Q13342 867 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 IL18Q14116 193 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 TEAD4Q15561 434 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 SHFQ7M4L6 423 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 ZNF551Q7Z340 670 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 GPSM1Q86YR5 675 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 SLC5A8Q8N695 610 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 TOP6BLQ8N6T0 577 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 SETD7Q8WTS6 366 aaKnown RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 C10orf90Q96M02 699 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 FAM193BQ96PV7 902 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 ULBP1Q9BZM6 244 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 POLR2J2Q9GZM3 115 aaKnown RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 NMUR1Q9HB89 426 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 ISYNA1Q9NPH2 558 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 BABAM2Q9NXR7 383 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 NDOR1Q9UHB4 597 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 PCDHGA9Q9Y5G4 932 aaKnown RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 NYNRINQ9P2P1 1898 aaKnown RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 TMEM82A0PJX8 343 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 G3V3Q6 166 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 TNFRSF11BO00300 401 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 GPR171O14626 319 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 PDCD5O14737 125 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 PPEF2O14830 753 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 PSIP1O75475 530 aaKnown RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 HBQ1P09105 142 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 SMIM6P0DI80 62 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 LCN1P31025 176 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 BDKRB1P46663 353 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 KCNJ5P48544 419 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 RENBPP51606 427 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 KCNJ10P78508 379 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 C2orf80Q0P641 193 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 TMEM132BQ14DG7 1078 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 SV2CQ496J9 727 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 PLK5Q496M5 336 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 RAB41Q5JT25 222 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 ZNF648Q5T619 568 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 MANEALQ5VSG8 457 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 ZNF57Q68EA5 555 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 OVOS1Q6IE37 1185 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 MZT2AQ6P582 158 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 PAQR3Q6TCH7 311 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 FAM198BQ6UWH4 519 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 CLEC20AQ6ZU45 233 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 LAS2Q8IYD9 372 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 LINC01465Q8N7H1 131 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 DNAJC5GQ8N7S2 189 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 SCARB1Q8WTV0 552 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 NELL2Q99435 816 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 SLC39A8Q9C0K1 460 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 FN3KQ9H479 309 aa11.49□□□□□ -0.57
CAPN3-221ENST00000638141 EIF2B4Q9UI10 523 aaKnown RBP11.49□□□□□ -0.57
CAPN3-221ENST00000638141 TRAV6A0A075B6T7 132 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 CARNS1A5YM72 827 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 NPEPPSL1A6NEC2 478 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 ARRDC5A6NEK1 342 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 SYN3O14994 580 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 FABP1P07148 127 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 UGT2B7P16662 529 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 GPX2P18283 190 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 CXCL3P19876 107 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 LMO2P25791 158 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 NRG1Q02297 640 aaPredicted RBP11.48□□□□□ -0.57
CAPN3-221ENST00000638141 GPR17Q13304 367 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 Q3ZCU0 254 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 NOMO2Q5JPE7 1267 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 SEZ6L2Q6UXD5 910 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 C17orf107Q6ZR85 190 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 RAB11FIP2Q7L804 512 aa11.48□□□□□ -0.57
CAPN3-221ENST00000638141 TRIM46Q7Z4K8 759 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms