RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SYNDIG1LA6NDD5 238 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 FCHO1O14526 889 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 CTNSO60931 367 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 NEURL1O76050 574 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 RHOXF2BP0C7M4 288 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 MST1P26927 711 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 PIK3CBP42338 1070 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 PHEXP78562 749 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 STX4Q12846 297 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 CPSF6Q16630 551 aaKnown RBP eCLIP15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 C4orf17Q53FE4 359 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 DEPDC1Q5TB30 811 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 ZNF468Q5VIY5 522 aaPredicted RBP15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 GFRALQ6UXV0 394 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 NCLNQ969V3 563 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 RGMAQ96B86 450 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 REPS1Q96D71 796 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 VMP1Q96GC9 406 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 SCMH1Q96GD3 660 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 RHOXF2Q9BQY4 288 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 CCDC77Q9BR77 488 aa15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 SORBS1Q9BX66 1292 aaKnown RBP15.64■□□□□ 0.09
CACNA1A-259ENST00000638114 LRRTM2O43300 516 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 UGDHO60701 494 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 LDB3O75112 727 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 SMIM24O75264 130 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 SCELO95171 688 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 UNC5CO95185 931 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 SP1P08047 785 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 ABHD2P08910 425 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 SNRPAP09012 282 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 COL6A2P12110 1019 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 CPN2P22792 545 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 CYB561P49447 251 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 RPS13P62277 151 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 SLAMF1Q13291 335 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 ELAVL1Q15717 326 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 MAPKAPK3Q16644 382 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 OR4C11Q6IEV9 310 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 SLC25A25Q6KCM7 469 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 METTL2BQ6P1Q9 378 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 GALNTL5Q7Z4T8 443 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 TMEM132CQ8N3T6 1108 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 ATP6V1E2Q96A05 226 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 ALOXE3Q9BYJ1 711 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 NOL11Q9H8H0 719 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 SEC14L3Q9UDX4 400 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 TMCO1Q9UM00 188 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 RNF11Q9Y3C5 154 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 TSC22D4Q9Y3Q8 395 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 CLCA3PQ9Y6N3 262 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 NAV2Q8IVL1 2488 aa15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 DIDO1Q9BTC0 2240 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-259ENST00000638114 WIPF3A6NGB9 483 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 H0YIV9 168 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 PLPP1O14494 284 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 CDK2AP1O14519 115 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 SLC25A12O75746 678 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 CLDN9O95484 217 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 STSP08842 583 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 HLCSP50747 726 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 CCNG1P51959 295 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 PER3P56645 1201 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 ID2Q02363 134 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 SERTAD2Q14140 314 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 ZRSR2Q15696 482 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 LGSNQ5TDP6 509 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 HIST2H2BCQ6DN03 193 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 TRMT10CQ7L0Y3 403 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 L3MBTL4Q8NA19 623 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 FAM98AQ8NCA5 519 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 DAZLQ92904 295 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 TMEM125Q96AQ2 219 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 CDK15Q96Q40 435 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 MRPL57Q9BQC6 102 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 MRPL46Q9H2W6 279 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 VTI1BQ9UEU0 232 aa15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 ZNF223Q9UK11 482 aaPredicted RBP15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 PPIEQ9UNP9 301 aaKnown RBP15.62■□□□□ 0.09
CACNA1A-259ENST00000638114 STX16-NPEPL1H3BU86 382 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 OR7A17O14581 309 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 STX16O14662 325 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 RIPK2O43353 540 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 ITGA10O75578 1167 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 ZFAND5O76080 213 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 TNNI3P19429 210 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 PTX3P26022 381 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 TRHRP34981 398 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 NEK2P51955 445 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 ALDH6A1Q02252 535 aaKnown RBP15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 C1QL3Q5VWW1 255 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 ARMC10Q8N2F6 343 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 TMEM156Q8N614 296 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 OR52B6Q8NGF0 335 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 OR14A16Q8NHC5 309 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 WDR20Q8TBZ3 569 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 FRMD6Q96NE9 622 aa15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 NSUN5Q96P11 429 aaKnown RBP15.61■□□□□ 0.09
CACNA1A-259ENST00000638114 MS4A12Q9NXJ0 267 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms