RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 POMPQ9Y244 141 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 PPIL1Q9Y3C6 166 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 A0A087X1B8 175 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 DPPA5A6NC42 116 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 SLC9B1P1A6NJY1 282 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 TMEM150CB9EJG8 249 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 E9PBE3 544 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 SLCO1B7G3V0H7 640 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 CASQ2O14958 399 aaPredicted RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 NPHS1O60500 1241 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 KLHL41O60662 606 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 SORBS2O94875 1100 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 C9P02748 559 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ANKRD34CP0C6C1 535 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 PIM1P11309 404 aaPredicted RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 CD1EP15812 388 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 PAX7P23759 505 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 PIK3R1P27986 724 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 SERPINB5P36952 375 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 RPL14P50914 215 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 PGGT1BP53609 377 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 TBL3Q12788 808 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 PRKG2Q13237 762 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 POU6F1Q14863 301 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 DEFB110Q30KQ9 67 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 LSM12Q3MHD2 195 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 C3orf36Q3SXR2 165 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ARL13AQ5H913 290 aaPredicted RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 TMTC4Q5T4D3 741 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 OR52E8Q6IFG1 317 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 LCN10Q6JVE6 187 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 CYP2R1Q6VVX0 501 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 KIAA0408Q6ZU52 694 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 RBM12BQ8IXT5 1001 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 DEFB107AQ8IZN7 70 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 FBXW8Q8N3Y1 598 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 RNF152Q8N8N0 203 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 PPFIBP2Q8ND30 876 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ECSITQ9BQ95 431 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ZDHHC2Q9UIJ5 367 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 PRPF19Q9UMS4 504 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 DNAJC13O75165 2243 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 C21orf140B9A014 251 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 PDE5AO76074 875 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 VAPBO95292 243 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 JUNP05412 331 aaKnown RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 MMP2P08253 660 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 SLC35G4P0C7Q5 338 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 FGF5P12034 268 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 HLA-DPA1P20036 260 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 CD151P48509 253 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 TAS2R39P59534 338 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 HSD11B2P80365 405 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 LAPTM5Q13571 262 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 CNN3Q15417 329 aaKnown RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 RPE65Q16518 533 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 PGS1Q32NB8 556 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 TECRLQ5HYJ1 363 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 SH2D4BQ5SQS7 431 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 IZUMO2Q6UXV1 221 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 FAM83HQ6ZRV2 1179 aaPredicted RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 RAPH1Q70E73 1250 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 OOSP2Q86WS3 158 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 LILRA3Q8N6C8 439 aaPredicted RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 TEX26Q8N6G2 289 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 THAP4Q8WY91 577 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 SNRNP40Q96DI7 357 aaKnown RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 IMP4Q96G21 291 aaKnown RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 ZNF514Q96K75 400 aaPredicted RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 NR1H4Q96RI1 486 aaPredicted RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 DMRTA2Q96SC8 542 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 SLC25A51Q9H1U9 297 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 MRPL46Q9H2W6 279 aaKnown RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 FANCEQ9HB96 536 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 ACOT9Q9Y305 439 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 ANKRD12Q6UB98 2062 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 CCDC78A2IDD5 438 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 ANKUB1A6NFN9 424 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 DPM1O60762 260 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 ALOX12BO75342 701 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 LPLP06858 475 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 STMN1P16949 149 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 TFEBP19484 476 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 NCF2P19878 526 aaPredicted RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 PPARGP37231 505 aaPredicted RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 NAGLUP54802 743 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 WNT3AP56704 352 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 PCBP3P57721 371 aaKnown RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 RPL26P61254 145 aaKnown RBP4.61□□□□□ -1.67
LINC00550-201ENST00000629293 XIAPP98170 497 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 CTBP1Q13363 440 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 CUL3Q13618 768 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 CFAP157Q5JU67 520 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 LYPLAL1Q5VWZ2 237 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 PDSS2Q86YH6 399 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 HPS6Q86YV9 775 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 SYTL1Q8IYJ3 562 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 TRAM1L1Q8N609 369 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 OR13J1Q8NGT2 312 aa4.61□□□□□ -1.67
LINC00550-201ENST00000629293 RP9Q8TA86 221 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms